Skip to menu Skip to content Skip to footer
The University of Queensland
  • Study
  • Research
  • Partners and community
  • About
Institute for Molecular Bioscience
  • Home
  • About
    • About
    • Board
    • Annual reports
    • UN Sustainable Development Goals
    • Diversity and inclusion
    • Art and Science at IMB
    • History
  • People
    • People
    • Executive Director
    • Senior Leadership Team
    • Research leaders
    • Women in science
    • Ambassadors
    • Early-Mid Career Researchers (EMCRs)
  • Research
    • Research
    • > Research Groups
    • > Research Centres
    • > Research Facilities
    • > Partner with us
    • Cardiovascular disease
    • Antimicrobial resistance
    • Venom
    • Endometriosis
    • COVID-19
  • Study
    • Study
    • PhD
    • Masters
    • Honours
    • Undergraduate
    • Scholarships
    • Students of IMB Association (SIMBA)
  • Get Involved
    • Get Involved
    • Events
    • Become a Corporate Partner
    • Join the Director's Circle
    • Join our Alumni
    • Soils for Science
    • Become an IMB Champion
    • The Edge Magazine
    • Science Journalist-in-Residence
  • News
  • Donate
  • Contact us
  • Study
  • Research
  • Partners and community
  • About
  • UQ home
  • News
  • Events
  • Give
  • Contact
  • UQ home
  • News
  • Events
  • Give
  • Contact
Institute for Molecular Bioscience
  • Home
  • About
    • Board
    • Annual reports
    • UN Sustainable Development Goals
    • Diversity and inclusion
    • Art and Science at IMB
    • History
  • People
    • Executive Director
    • Senior Leadership Team
    • Research leaders
    • Women in science
    • Ambassadors
    • Early-Mid Career Researchers (EMCRs)
  • Research
    • > Research Groups
    • > Research Centres
    • > Research Facilities
    • > Partner with us
    • Cardiovascular disease
    • Antimicrobial resistance
    • Venom
    • Endometriosis
    • COVID-19
  • Study
    • PhD
    • Masters
    • Honours
    • Undergraduate
    • Scholarships
    • Students of IMB Association (SIMBA)
  • Get Involved
    • Events
    • Become a Corporate Partner
    • Join the Director's Circle
    • Join our Alumni
    • Soils for Science
    • Become an IMB Champion
    • The Edge Magazine
    • Science Journalist-in-Residence
  • News
  • Donate
  • Contact us

Training Manuals

  1. Home
  2. Research
  3. > Research Facilities
  4. Microscopy

Analysis Computers

Mac 1-3 Computers running Mac OSX and Windows 7

Hold Down “Option” Key at computer Startup to choose Operating System Analysis

PC’s PC Software: Imaris, AutoQuant, Image Pro Plus, Nikon NIS, ImageJ, Office, NRecon, Dataviewer, Drishti, Zeiss Zen 2009.

MAC Software: Imaris, ImageJ, Office, Drishti.

Mac Pro, 2 x Intel Xeon 4 Core 2.93Ghz CPU, 24Gb RAM, nVidia GTX285 1000Mb GPU, 2 x 320Gb Velociraptor HDD, 2 x 1Tb HDD, 30" LCD monitor.

 

Virtual Computing Machines (VM's) - connect via Remote Desktop via Mac 1-3 or via your desktop/laptop computer.

ImageJ (FIJI), Imaris, Arivis, Microvolution, Zen, LAS-X.

Huygens HyVolution. For more information: Huygens Imaging Academy
 

Connecting to the Analysis VM Guide (PDF)

Confocal Training Manuals

Clicking on the links below will either open or download a .pdf file depending on your browser settings.

  • Confocal 1 (Leica STED) Training Manual

  • Confocal 2 (Zeiss 880 Invert with Fast Airyscan) Training Manual

  • Confocal 3 (Zeiss 710 Upright) Training Manual

  • Confocal 4 (Zeiss 710 Invert) Training Manual

    • AiryScan Training Manual

    • Mai Tai Multi-Photon Laser Training Manual

  • Confocal 5 (Zeiss 710 Invert) Training Manual

  • Zeiss Axiovert Spinning Disc Confocal Training Manual

    • Spinning Disc Camera Alignment Manual

  • Andor Dragonfly Spinning Disc with TIRF

Deconvolution Manuals

Clicking on the links below will either open or download a .pdf file depending on your browser settings.

  • Nikon Deconvolution Training Manual
  • Personal Deltavision Training Manual

Routine Widefield Manuals

Clicking on the links below will either open or download a .pdf file depending on your browser settings.

  • BF/DF Training Manual
  • Basic widefield (Fluoro1, 3-5) Training Manual
  • Fluoro 2 (Zeiss AxioImager with Apotome) Training Manual

Specialty Manuals

Clicking on the links below will either open or download a .pdf file depending on your browser settings.

  • FLIM/FRET Training Manual (to follow)
  • OPT (Optical Projection Tomography) Training Manual

Stereo Manuals

Clicking on the links below will either open or download a .pdf file depending on your browser settings.

  • Stereo 1 Training Manual
  • Stereo 2 Training Manual

IMB Microscopy Resources Online

General Information

Sample Prep

Image Capture

Image Analysis

Visualisation

Structured Training

 

 

  • Confocal Microscopes
  • Hardware and software
  • Publications
  • Resources
  • Announcements
  • Image Analysis
  • Lightsheet and Specialty Microscopes
  • Questionnaires
  • Script Settings
  • Spinning Disc Confocal
  • Stereo Microscopes
  • Widefield Microscopes
  • Widefield microscopes with incubation
Australian Aboriginal Flag Torres Strait Islander Flag UQ acknowledges the Traditional Owners and their custodianship of the lands on which UQ is situated. — Reconciliation at UQ
  • Media

    • Media team contacts
    • Find a subject matter expert
    • UQ news
  • Working at UQ

    • Current staff
    • Careers at UQ
    • Strategic plan
    • Staff support
    • IT support for staff
  • Current students

    • my.UQ
    • Programs and courses
    • Key dates
    • Student support
    • IT support for students
  • Library

    • Library
    • Locations and hours
    • Library services
    • Research tools
  • Contact

    • Contact UQ
    • Find a researcher
    • Faculties, schools, institutes and centres
    • Divisions and departments
    • Campuses, maps and transport
    • Media team contacts
    • Find a subject matter expert
    • UQ news
    • Current staff
    • Careers at UQ
    • Strategic plan
    • Staff support
    • IT support for staff
    • my.UQ
    • Programs and courses
    • Key dates
    • Student support
    • IT support for students
    • Library
    • Locations and hours
    • Library services
    • Research tools
    • Contact UQ
    • Find a researcher
    • Faculties, schools, institutes and centres
    • Divisions and departments
    • Campuses, maps and transport
Web login
  • © The University of Queensland
  • ABN: 63 942 912 684
  • CRICOS: 00025B
  • TEQSA: PRV12080
  • Privacy and terms of use
  • Accessibility
  • Right to information
  • Feedback