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Coin Group
Group Leader
Dr Lachlan Coin
Honorary Associate ProfessorInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Body:Highlights
Professor Lachlan Coin is a mathematician with a research focus on developing genomics and bioinformatics tools in infectious disease and cancer. He was originally drawn by the rigour and intellectual challenge of pure mathematics but now uses his maths background as a toolkit for solving complex problems in analysing high throughput biological data.
Professor Coin is best known for using approaches borrowed from machine learning, statistics and probability theory to interrogate genomic data.
In particular, Professor Coin has focussed on using these approaches to uncover genomic deletions and amplifications and has identified changes that are associated with increased risk of obesity and diabetes.
He has also developed approaches for finding minimal biomarker signatures associated with disease, and has applied these approaches to find biomarkers that distinguish bacterial from viral infection, and for the presence of active tuberculosis infection. He is also applying his methodology to develop a diagnostic tool for cancer from cell free DNA
Ultimately, Professor Coin is motivated by making discoveries that are routinely used in clinical practice and to inform public policy to improve health outcomes.
Professor Coin holds an Honorary Professor appointment with UQ, and is a Professor at the Doherty Institute at the University of Melbourne.
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Researchers
Dr Quan Nguyen
Senior Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Dr Quan Nguyen is a Group Leader at the Institute for Molecular Bioscience (IMB), The University of Queensland. He is leading the Genomics and Machine Learning (GML) lab to study neuroinflammation and cancer-immune cells at single-cell resolution and within spatial morphological tissue context. His research interest is about revealing gene and cell regulators that determine the states of the complex cancer and neuronal ecosystems. Particularly, he is interested in quantifying cellular diversity and the dynamics of cell-cell interactions within the tissues to find ways to improve cancer diagnosis or cell-type specific treatments or the immunoinflammation responses that cause neuronal disease.
Using machine learning and genomic approaches, his group are integrating single-cell spatiotemporal sequencing data with tissue imaging data to find causal links between cellular genotypes, tissue microenvironment, and disease phenotypes. GML lab is also developing experimental technologies that enable large-scale profiling of spatial gene and protein expression (spatial omics) in a range of cancer tissues (focusing on brain and skin cancer) and in mouse brain and spinal cord.
Dr Quan Nguyen completed a PhD in Bioengineering at the University of Queensland in 2013, postdoctoral training in Bioinformatics at RIKEN institute in Japan in 2015, a CSIRO Office of Chief Executive (OCE) Research Fellowship in 2016, an IMB Fellow in 2018, an Australian Research Council DECRA fellowship (2019-2021), and is currently a National Health and Medical Research Council leadership fellow (EL2). He has published in top-tier journals, including Cell, Cell Stem Cell, Nature Methods, Nature Protocols, Nature Communications, Genome Research, Genome Biology and a prize-winning paper in GigaScience. In the past three years, he has contributed to the development of x8 open-source software, x2 web applications, and x4 databases for analysis of single-cell data and spatial transcriptomics. He is looking for enthusiastic research students and research staff to join his group.
Students
Dr Son Nguyen
Higher degree by research (PhD) studentInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Ms Miranda Pitt
Higher degree by research (PhD) studentInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Mr Haojing Shao
Higher degree by research (PhD) studentInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Mr Chenxi Zhou
Higher degree by research (PhD) studentInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Mr Hyun Jae Lee
Higher degree by research (PhD) studentInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Ms Janice Reid
Honours studentInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Ms Dilys Li
Honours studentInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Support staff
Blaskovich Group
Group Leader
Professor Mark Blaskovich
Director of Translation, IMBProfessorial Research Fellow & GL & IMB Director of Translation of Institute for Molecular BioscienceInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Professor Mark Blaskovich is an antibiotic hunter and Director of Translation at the Institute for Molecular Bioscience at The University of Queensland. He is co-founder and former Director of the Centre for Superbug Solutions at IMB.
A medicinal chemist with 15 years of industrial drug development experience prior to his academic career, Mark has been developing new antibiotics to treat drug resistant pathogens and using modified antibiotics to detect bacterial infections. He is a co-founder of the Community for Open Antimicrobial Drug Discovery, a global antibiotic discovery initiative, and has led a number of UQ-industry collaborations focused on antibiotic development. An inventor on eleven patent families, Mark has developed drugs in clinical trials, published more than eighty research articles, and received over $10m in grant funding.
Researchers
Dr Johannes Zuegg
Senior Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Dr Sanjaya Kc
Research OfficerInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Ms Soumya Ramu
Institute for Molecular BioscienceResearcher profile is public:0Supervisor:Ms Maite Amado
Casual Floor Manager & Floor ManagerInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Dr Anthony Verderosa
Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Doctor Anthony Verderosa is a Postdoctoral Researcher at the Institute for Molecular Bioscience (IMB) at the University of Queensland (UQ). Verderosa is the head researcher of a team dedicated to the design, synthesis, and microbiological evaluation of antibiotic conjugates. Their project involves synthetically linking different antibiotics and/or antibiotic adjuvants to generate novel dual-acting antimicrobial conjugates to treat resistant bacterial infections. Verderosa is an early career researcher (ECR) with expertise in synthetic organic chemistry, molecular bacteriology, antimicrobial testing, drug development, and biofilm remediation. His PhD (2020) involved transdisciplinary work (chemistry/microbiology) that focused on discovering and developing nitroxide-functionalised antibiotics - new drugs for treating and eradicating microbial biofilms. After submitting his PhD, Verderosa accepted a Postdoctoral Research position in molecular bacteriology and bacterial pathogenesis, where he developed new methods and strategies for tackling antimicrobial resistance.
Miss Holly Floyd
Researcher profile is public:0Supervisor:Support Staff
Miss Veah Tapat
Manager, ResearchInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:PhD Students
Mr Abdulmujeeb Onawole
Associate Research Assistant/TechnicianInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Ms Michelle Novais de Paula
Researcher profile is public:0Supervisor:Sadaf Khan
External PhD StudentsResearcher profile is public:1Supervisor:Mr Ye Yuan
PhD studentInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Ms Paulina Hall
Global Challenges ScholarInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Mr Glen Lamb
Researcher profile is public:0Supervisor:Mx Lily Kenchington-Evans
Global Challenges ScholarInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Miss Xiaowen Xu
Researcher profile is public:1Supervisor:Ms Rhiannon Baxter
PhD studentInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Marut Jain
External PhD StudentsResearcher profile is public:1Supervisor:- PhD StudentInstitute for Molecular Bioscience
- Visiting AcademicInstitute for Molecular Bioscience
- PhD studentInstitute for Molecular Bioscience
- Senior Research FellowInstitute for Molecular Bioscience
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Strawberry DNA extraction activity
Extract and view DNA from a strawberry using common household ingredients.
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The Edge: Genetics
People have known for thousands of years that parents pass traits to their children, but it is only relatively recently that our technology has caught up to our curiosity, enabling us to delve into the mystery of how this inheritance occurs, and the implications for predicting, preventing and treating disease.
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