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- Research OfficerInstitute for Molecular Bioscience
Research Leaders
Professor Brett Collins
Director, Centre for Cell Biology of Chronic DiseaseNHMRC Leadership Fellow - GL & Centre Director of Institute for Molecular BioscienceInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Brett Collins is an NHMRC Career Development Fellow and head of the Molecular Trafficking Lab at UQ's Institute for Molecular Bioscience. He was a lead investigator in the seminal structural studies of AP2, the protein adaptor molecule central to clathrin-mediated endocytosis, and has since defined the molecular basis for the function of critical proteins regulating membrane trafficking and signalling at the endosome organelle. His team is now focused on understanding how discrete molecular interactions between proteins and lipids control these processes in human cells.
Associate Professor Collins was awarded his PhD in 2001 and has published over 75 papers including in Cell, Nature, Nature Structural and Molecular Biology, Developmental Cell, and The Proceedings of the National Academy of Sciences USA, altogether cited more than 3100 times. He is the recipient of 3 prestigious fellowships, including a previous Career Development Award from the National Health and Medical Research Council and a Future Fellowship from the Australian Research Council, and was awarded the University of Queensland Research Excellence Award in 2008. In 2015 he was awarded the Emerging Leader Award of the ANZSCDB and in 2016 the Merck Research Medal from the ASBMB. He is currently the President of the Queensland Protein Group.
Body:Highlights
Seeing the structure of a protein at the atomic level as an undergrad set off a career in structural biology for Brett Collins. His interest in how cells work, and the techniques used to visualise the complex interaction mechanisms of the structures within, earned him his PhD in 2001. Postdoctorate work at Cambridge University steered him towards ‘membrane trafficking’, the term used to describe how proteins are moved from one part of a cell to another, or indeed between cells, via a complex system of membranes.
Now, as head of IMB’s Membrane Trafficking Group, he’s using techniques such as X-ray crystallography and cryo-electron microscopy to visualise protein structure at the atomic level to investigate why things sometimes go wrong with our cells’ protein transport system. Faulty proteins are known to cause the development of neurodegenerative conditions such as Parkinson’s and Alzheimer’s disease, and muscular dystrophy.
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Dr Nicholas Ariotti
Senior Research Fellow - GLInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Associate Professor Frederic Gachon
Honorary Associate ProfessorInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Dr Larisa Labzin
ARC Future FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Dr. Larisa Labzin studies how our innate immune system detects viral infections and how it decodes different signals to mount an appropriate immune response. Dr. Labzin's interest in innate immunity started during her honours training with Prof. Matt Sweet at the IMB, looking at how inflammatory signalling is regulated in macrophages. After gaining more experience while working as a research assistant for Prof. Sweet, she moved to Germany to the University of Bonn for her PhD. At the Univeristy of Bonn, Dr. Labzin investigated the anti-inflammatory effects of High-Density Lipoprotein with Prof. Eicke Latz. Here she discovered novel regulatory pathways that control inflammation. Dr. Labzin then moved to Cambridge, UK as an EMBO postdoctoral fellow to work with Dr. Leo James at the Medical Research Council Laboratory for Molecular Biology. In Dr. James' lab Dr. Labzin focused on how viruses are sensed by the innate immune system to trigger inflammation. In particular, Dr Labzin investigated how antibodies change the way viruses trigger inflammation. While in Cambridge, Dr. Labzin was awarded an NHMRC CJ Martin Fellowship to return to Australia. Larisa returned to the IMB in September 2019 to work with Prof. Kate Schroder. Dr. Labzin is an IMB Fellow and leads an independent research team studying inflammation in response to influenza and SARS-CoV-2.
Associate Professor Anne Lagendijk
Senior Principal Research Fellow - GLInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Body:Highlights
Dr Anne Lagendijk's research focusses on the development and maintenance of a functional blood vessel network. These cells that make up the vessels continuously adapt their size, adhesiveness and compliance order to ensure the right balance between vessel integrity and permeability in a context dependent manner. Mechanical cues play a major role in the functional adaptation of blood vessels. Despite ongoing research unraveling the structural components of mechanical hubs in the cells, it is essential to assess the magnitude of forces that are transduced at these sites and the biological consequences for vessel function. She has previously developed a VE-cadherin tension biosensor line in zebrafish. This line provides the first vertebrate model that reports intra-molecular tension. Dr Lagendijk utilised this tool to identify changes in junctional organisation and VE-cadherin tension that occur as arteries mature and revealed molecular pathways that allow for this maturation to happen.
In addition, she has developed new disease models that are allowing her to probe the initiating mechanisms of vascular malformations that lead to neurological deficits and stroke with unprecedented cellular and subcellular resolution. Dr Lagendijk is currently continuing on from her previous work by investigating how forces and mechanically induced pathways at distinct mechanically active sites in the cell contribute to building and maintaining a healthy vasculature.
Dr Christian Nefzger
Senior Research Fellow - GLInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Kindly visit my laboratory's webpage for more information
Professor Michael O'Sullivan
Honorary Professor & Professorial Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Overview
Professor Michael O'Sullivan is a neuroscientist, neurologist and group leader at the Institute for Molecular Bioscience (IMB). His main research interest is the neurobiology of brain injury, with an emphasis on mechanisms of resilience and recovery of the brain after injury. His previous work has developed understanding in two broad areas:
- The cognitive neuroscience of memory and cognitive control – and how distributed and dynamic networks in the brain support these functions, which are often affected by injury.
- How injury alters network structure and function leading to symptoms in day-to-day life - and intrinsic mechanisms of neural adaptation that modulate the effect of injury
At the Institute for Molecular Bioscience, O'Sullivan is building a research program on cellular and molecular events that influence adaptation and recovery, including the role of innate immunity and glial cells. This program includes novel approaches to neuroprotection and the role of astrocytes as key regulators of glutamate and neuroinflammation. A major theme is identification of therapeutic targets, and evaluation of disease progression or treatment response in vivo, using advanced human imaging with MRI, PET and novel radiotracers. In addition to his Institute work, O'Sullivan leads clinical and biomarker projects in stroke and traumatic brain injury and is a member of the NHMRC Centre for Research Excellence in vascular mechanisms of cognitive impairment.
The group is at the forefront in the application of advanced techniques to investigate brain structure and function in vivo, including diffusion MRI and tractography, the use of functional MRI and EEG to examine to examine dynamic network interactions, and PET to examine neurochemistry.
Supervision
Professor O'Sullivan supervises PhD projects across multiple research areas, including clinical science, cognitive neuroscience, animal models and computational neuroscience (such as machine learning and deep learning algorithms for diagnosis and prediction of prognosis). Expressions of interest from potential PhD and honours students are welcome.
Professor Nathan Palpant
National Heart Foundation of Australia Future Leader Fellow - Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Career Summary: 2009: PhD, University of Michigan, USA with training in cardiac physiology, modelling myocardial ischemia in vivo and in vitro, and development of therapeutic approaches for myocardial ischemia; 2009–2015: Postdoctoral Research Fellow, University of Washington, Institute for Stem Cell and Regenerative Medicine, USA with training in stem cell biology, genomics, genome editing, and cell therapeutics for ischemic heart disease; 2015–current: Group Leader, University of Queensland (UQ), Institute for Molecular Bioscience; 2022-current: Associate Professor, UQ; 2018–2021 and 2023-2026: National Heart Foundation Future Leader Fellow. Dr. Palpant's research team has expertise in human stem cell biology, computational genomics, and cardiac physiology, which enables them to translate outcomes from cell biology and genomics to disease modelling, drug discovery, and preclinical modelling.
Body:Latest publication
Dr Palpant and colleagues have published the most in-depth study of exactly how human stem cells can be turned into heart cells. The work involved measuring changes in gene activity in tens of thousands of individual cells as they move through the stages of heart development.
Unlike those tissues, the heart does not have the capacity for self-repair after damage (such as a heart attack). This is one reason why heart disease is the leading cause of death worldwide. This research may help us find ways to repair the heart in the future. Read more
Highlights
The Stem Cells and Cardiovascular Development lab run by Dr Nathan Palpant uses human pluripotent stem cells (hPSCs), genomics, genome editing, and disease modelling to study mechanisms controlling cardiovascular development and disease.
Cardiovascular disease is the leading cause of death worldwide and new therapeutics are required to address growing public health demands. Expanding treatment options for cardiovascular diseases requires interdisciplinary research from developmental biology to translation.
To this end, Dr Palpant leads functional genomics and epigenetic studies at single cell resolution and across diverse cardiac and vascular fates to determine the genetic basis of cell identity and fate.
His team is developing stem cell models of disease for drug discovery. They are also building links with clinician/researchers bringing together stem cell biology, mechanical-assist devices, and large animal disease models to identify new approaches to address cardiovascular disease.
Dr Palpant received training in cardiac physiology (PhD, University of Michigan) and developmental biology and genomics (University of Washington), resulting in 27 publications in high-impact journals including Nature, Nature Protocols, and Development.
In November 2015, Dr Palpant relocated to The University of Queensland’s Institute for Molecular Bioscience to establish the Stem Cells and Cardiovascular Development Laboratory.
During his career, Dr Palpant has received internationally competitive awards and positions including:
- The International Society for Heart Research Young Investigator Award
- International speaking invitations in the US, Europe, Australia, and Asia
- He is an IMB Group Leader, Co-Director of Stem Cells Australia’s Cardiac Repair and Regeneration theme, and Co-Director of the Queensland Facility for Advanced Genome Editing.
Video
Using genomics to elucidate developmental cell lineage decisions, Dr Nathan Palpant
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Professor Robert Parton
Group Leader, Centre for Cell Biology of Chronic DiseaseARC Laureate Fellow - Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Our research focuses on understanding how cells work and what goes wrong in disease. We are studying the role of cellular organelles in defence against pathogens, the molecular changes underlying muscle disease, and optimising methods to deliver therapeutics to specific cell types in whole animals.
Professor Robert Parton is an ARC Laureate Fellow, a group leader in the IMB Centre for Cell Biology of Chronic Disease, and Deputy Director of the Centre for Microscopy and Microanalysis. He is a Fellow of the Australian Academy of Science and an Associate Member of EMBO.
Body:Highlights
Professor Rob Parton studies cells - the building blocks of life. His unique methodology uses electron microscopy to create 3D models of cells, which he then explores interactively with virtual reality.
As a cell biologist, Professor Parton has always been fascinated by the cell and captivated by the beauty that visualising a cell through microscopy reveals. He is the only researcher using this technique. Following his degree in Scotland and PhD in England, he went on to participate in fundamental science at The European Molecular Biology Laboratory in Heidelberg, Germany. It was a pivotal chapter in his career.
He is best known for understanding how the plasma membrane of cells works, and particularly the crater-like indents in the cell membrane called Caveolae. By revealing how the cell structure works, and most importantly what goes wrong in disease, Professor Parton is identifying the drug targets of the future. The range of techniques that he uses, working at the cellular level right through to using animals in cell biology, sets his research apart.
Professor Parton is Chief Editor of Traffic and Associate Editor for Molecular Biology of the Cell. He is a Fellow of the Australian Academy of Science.
Videos
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Professor Kate Schroder
NHMRC Leadership Fellow - Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Professor Kate Schroder heads the Inflammasome Laboratory and is Director of the Centre for Inflammation and Disease Research at the Institute for Molecular Bioscience (IMB), University of Queensland, as an NHMRC Leadership Fellow. Kate's graduate studies defined novel macrophage activation mechanisms and her subsequent postdoctoral research identified surprising inter-species divergence in the inflammatory programs of human versus mouse macrophages. As an NHMRC CJ Martin Fellow in Switzerland, Kate trained with the pioneer of inflammasome biology, Jürg Tschopp. The IMB Inflammasome Laboratory, which Kate heads, investigates the molecular mechanisms governing inflammasome activity and caspase activation, the cellular mediators of inflammasome-dependent inflammation, and mechanisms of inflammasome inhibition by cellular pathways and small molecule inhibitors.
Kate is a co-inventor on patents for small molecule inhibitors of the NLRP3 inflammasome, currently under commercialisation by Inflazome Ltd. Inflazome Ltd was recently acquired by Roche in a landmark deal – one of the largest in Australian and Irish biotech history. The acquisition gives Roche full rights to Inflazome's portfolio of inflammasome inhibitors. Two of the company's drug candidates are in clinical trials for the treatment of debilitating conditions such as cardiovascular disease, arthritis and neurodegenerative diseases such as Parkinson's, Alzheimer's and motor neuron disease.
Kate has authored more than 140 publications, featuring in journals such as Science, Cell, Nature Genetics, Nature Medicine, Nature Chemical Biology, Journal of Experimental Medicine and PNAS USA, and her work has been cited more than 35,000 times. Kate is an Editorial Board Member for international journals including Science Signaling, Clinical and Translational Immunology and Cell Death Disease. She is the recipient of the 2022 Women in Technology Excellence in Science Award, 2020 Nancy Mills Award for Women in Science, 2019 ANZSCDB Emerging Leader Award, 2019 Merck Research Medal, 2014 Milstein Young Investigator Award, 2013 Tall Poppy Award, 2012 Gordon Ada Career Award, 2010 QLD Premier's Postdoctoral Award, and the 2008 Society for Leukocyte Biology's Dolph Adams Award.
INFLAMMASOME LABORATORY RESEARCH
During injury or infection, our body's immune system protects us by launching inflammation. But uncontrolled inflammation drives diseases such as gout, diabetes, neurodegenerative disease and cancer. The Inflammasome Lab is defining the molecular and cellular processes of inflammation. We seek to unravel the secrets of inflammasomes – protein complexes at the heart of inflammation and disease – to allow for new therapies to fight human diseases.
The Inflammasome Laboratory integrates molecular and cell biology approaches with in vivo studies to gain a holistic understanding of inflammasome function during infection, and inflammasome dysfunction in human inflammatory disease. Current research interests include the molecular mechanisms governing inflammasome activity and caspase activation, the cellular mediators of inflammasome-dependent inflammation, and inflammasome suppression by autophagy and small molecule inhibitors.
Body:Highlights
Professor Kate Schroder is an immunologist fascinated by the biology of the innate immune system.
She is an expert on the inflammasome, a cell signalling pathway that generates inflammation.
Professor Schroder’s PhD studies defined novel activation mechanisms of macrophages, an important cell of the innate immune system, and her subsequent postdoctoral research identified surprising inter-species divergence in the inflammatory programs of human versus mouse macrophages.
As an NHMRC CJ Martin Fellow in Switzerland, she then trained with the pioneer of inflammasome biology, Jürg Tschopp. After returning to Australia, Professor Schroder established her laboratory, which is dedicated to inflammasome research.
The Schroder Lab are defining mechanisms of inflammasome signalling in innate immune cells, with the goal of developing new drugs to fight infection or inflammatory disease. For example, through multidisciplinary collaboration, the Schroder Lab have characterised new anti-inflammatory compounds that inhibit inflammasomes. These are currently under commercialisation for their potential as novel anti-inflammatory drugs.
Professor Schroder is Director of the IMB Centre for Inflammation and Disease Research, and serves on the editorial boards of several major journals, including Science Signaling, Clinical and Translational Immunology, and Cell Death Discovery.
She also served on the Scientific Advisory Board of a new start-up company that is developing inflammasome inhibitors for the treatment of human inflammatory and neurodegenerative diseases. Professor Schroder is an ARC Future Fellow, and the recipient of international awards such as the Milstein Young Investigator Award from the International Cytokine and Interferon Society, and the Dolph Adams Award from the Society for Leukocyte Biology.
Video
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Dr Samantha Stehbens
Senior Principal Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Dr Stehbens is a cell biologist with a long-standing interest in understanding the fundamental mechanisms that regulate cell adhesion and the cytoskeleton. She has made key contributions to the fields of quantitative microscopy, cell motility, adhesion and the cytoskeleton with publications spanning multiple fields from ion channels in brain cancer, to growth factor signalling and autophagy. Her research group (joint between AIBN and IMB) aims to understand the fundamental principles of how cells integrate secreted and biomechanical signals from their local microenvironment to facilitate movement and survival. They have uncovered an entirely novel role for the microtubule cytoskeleton in protecting cells from cortical and nuclear rupture during cell migration in 3D cell migration and invasion. Using patient-derived tumour cells, coupled to genetic alteration and substrate microfabrication, they use state-of-the-art microscopy to understand the mechanisms of cell migratory behaviour required for cancer cells to traverse the body during metastasis.
Her graduate work in the laboratory of Alpha Yap (IMB IQ) discovered how the microtubule cytoskeleton regulates cell-cell adhesion. After which she relocated to The University of California San Francisco (UCSF) to work with Prof Wittmann, a microtubule biologist who is an expert in live-cell spinning disc microscopy. Here she worked at the cutting edge of biology imaging advancements as the greater bay area research community combines several of the top-laboratories for imaging technologies. Supported by a competitive American Heart Fellowship Post-Doctoral fellowship, she identified how microtubules coordinate protease secretion during migration to mediate cell-matrix adhesion disassembly. In 2013, she returned to Australia to expand her imaging-based skill set to focus on models of cancer cell biology. Working with Prof. Pamela Pollock (QUT) she uncovered how activating FGFR2 mutations resulted in a loss of cell polarity potentiating migration and invasion in endometrial cancer. Following this, she worked with Prof. Nikolas Haass (UQDI) a melanoma expert, investigating the role of microtubule +TIP proteins in 3D models of metastatic invasion before starting her lab at the Institute for Molecular Bioscience as an ARC Future Fellow.
Lab Overview
Cells in living organisms navigate highly crowded three-dimensional environments, where their coordinated migration provides the driving force behind developmental and homeostatic tissue maintenance. Our research aims to understand the fundamental principles underpinning how cells integrate secreted and biomechanical signals from their local microenvironment to facilitate cell movement and survival. We apply these findings to understand how cancer cells exploit this to metastasise or spread to distal tissues. We hypothesise that targeting the crosstalk between the cytoskeleton and the mechanical micro-environment, can be developed as an anti-metastatic approach.
Cancer cells spread aggressively through tissues by adapting their cell shape to fit the environment in addition to altering their environment so they can squeeze through tight tissue spaces. Cancer cells sense and become more invasive following changes in the biophysical properties their microenvironment including increases in stromal stiffness and interstitial fluid pressures. These changes make cancer cells mechanically compliant and adaptive to fluctuations in their surrounding environment allowing them to alter their shape to fit matrix physical attributes. As such, cells need mechanisms in place to 1) detect these physical limits, 2) deform their cortex whilst producing mechanical force for forward locomotion and 3) orient themselves to move through tissues. We focus on understanding- at the molecular level- how the microtubule cytoskeleton and microtubule associated proteins called +TIPs, regulate how cells move through physically challenging environments. To do this we utilize cutting-edge methodology including microchannel fabrication, novel light sheet microscopy, quantitative imaging methods in combination with patient-derived cell and 3D hydrogel models to recapitulate the 3D microenvironment.
Our research areas include:
- Cytoskeleton
- Cell adhesion
- Cell migration
- Cell mechanics
- Cancer cell biology
Areas of Expertise
Microtubules and Cell-Cell Adhesion
My early research, in the laboratory of Professor Alpha Yap, focused on understanding how the microtubule cytoskeleton regulates E-cadherin-based cell-cell adhesion. This work was the first to discover that it was the dynamacity, not simply the tethering, of the microtubule cytoskeleton that was critical for E-cadherin accumulation and junctional reinforcement. This was in addition to defining a previously unappreciated role for the cytokinetic machinery (Ect2) in regulating cell-cell adhesion
- Stehbens, S.J., …,and Yap, A. S. (2006). Dynamic Microtubules Regulate the Local Concentration of E-cadherin at Cell-Cell Contacts. Journal of Cell Science 119: 1801-1811
- Ratheesh, A., … Stehbens, S.J., and Yap, A.S. (2012). Centralspindlin and α-catenin regulate Rho signalling at the epithelial zonula adherens. Nature Cell Biology 14(8): 818-28
Microtubules and Cell-Matrix Adhesion
Following my PhD, I relocated to the University of California San Francisco to work with Professor Torsten Wittmann, an expert in live-cell spinning disc microscopy and microtubule functions during cell motility. This work was dogma changing and established how the microtubule interacting protein, CLASP, facilitates targeted protease secretion at focal adhesions during epithelial sheet migration to mediate cell-matrix adhesion disassembly, from the inside-out. It includes the first observation of live, directed exocytosis of the matrix protease MT1MMP at focal adhesions. Our work pioneered the combined application of quantitative live-cell protein dynamics and the application of the novel super resolution imaging technique, SAIM (Scanning Angle Interference Microscopy). During my time at UCSF I learnt how to custom design live-cell microscopes with these live-cell imaging platforms now commercially distributed as the Spectral Diskovery and Andor Dragonfly.
- Stehbens, S.J., … and Wittmann., T (2014). CLASPs link focal-adhesion-associated microtubule capture to localized exocytosis and adhesion site turnover. Nature Cell Biology 16(6): 558-570
- Stehbens, S.J., and Witmann, T. (2014) Analysis of focal adhesion turnover: a quantitative live-cell imaging example. Methods in Cell Biology 123: 335-46
- Stehbens, S.J., and Witmann, T. (2012) Targeting and transport: how microtubules control focal adhesion dynamics. Journal of Cell Biology 20, 198(4): 481-9
Cell Morphology and Cancer Biology
In 2013 I returned to Australia, joining the lab of Pamela Pollock with focus on applying my skill set to have translational impact. Here I described the impact of activating FGFR2b-mutations on endometrial cancer progession. These findings uncovered collective cell polarity and invasion as common targets of disease-associated FGFR2 mutations that lead to shorter survival in endometrial cancer patients.
Stehbens, S.J, Ju, R.J and Pollock P.M. (2018) FGFR2b activating mutations disrupt cell polarity to potentiate migration and invasion in endometrial cancer. Journal of Cell Science, 131(15)
Microtubules in Metastatic Plasticity
In 2017, I joined the Experimental Melanoma Group at UQDI, where I work together with Professor Nikolas Haass in applying innovative live-cell spinning disc confocal imaging and biosensor approaches to understand cell-cell and cell-matrix interactions of melanoma with its microenvironment. Our work explores the adaptive role that the microtubule cytoskeleton plays in facilitating cell shape plasticity, matrix remodelling and resistance to compression during migration in complex 3D matrix models of metastatic melanoma invasion. We are fundamentally interested in understanding the reciprocal biophysical relationship between the microtubule cytoskeleton and the microenvironment during melanoma invasion, with the aim to expand our findings to other metastatic cancers.
Ju, Robert J., Stehbens, Samantha J., Haass, Nikolas K. 2018, 'The Role of Melanoma Cell-Stroma Interaction in Cell Motility, Invasion, and Metastasis', Frontiers in Medicine, vol. 5
Professor Jennifer Stow
Professorial Research FellowNHMRC Leadership FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Professor Jennifer Stow is a molecular cell biologist, an NHMRC Leadership Fellow and head of the Protein Trafficking and Inflammation research laboratory in The University of Queensland's Institute of Molecular Bioscience (IMB). Her previous leadership appointments include as Division Head and Deputy Director (Research) at IMB (12 years) and she currently serves on national and international advisory boards, editorial boards and steering committees, and as an elected Associate Member of the European Molecular Biology Organisation (EMBO).
Jenny Stow received her undergraduate and PhD qualifications at Melbourne's Monash University before undertaking postdoctoral training in the Department of Cell Biology at Yale University School of Medicine, USA. With training as a microscopist in kidney research, she gained further experience at Yale as a postdoc in the lab of eminent cell biologist and microscopist, Dr Marilyn Farquhar, where protein trafficking was both a theme and a passion. Jenny then took up her first faculty appointment as an Assistant Professor in the Renal Unit at Massachusetts General Hospital (MGH) and Harvard Medical School in Boston USA, where her research uncovered new roles for a class of enzymes, GTPases, in regulating trafficking within cells. At MGH her research also formed part of a highly successful NIH Renal Cell Biology Program. In late 1994, Jenny moved her research lab back to Australia, to The University of Queensland, in late 1994 as a Wellcome Trust International Medical Research Fellow. As part of IMB since, the Stow lab has continued a focus on protein trafficking, including pioneering live-cell imaging, to spearhead their work on trafficking in inflammation, cancer and chronic disease. Major discoveries include identifying new proteins and pathways for recycling adhesion proteins in epithelial cells, inflammatory cytokine secretion in macrophages and immune signalling through Toll-like receptors in inflammation and infection. Small GTPases of the Rab family, signalling adaptors and kinases feature among the molecules studied in the Stow lab for their functional roles and their potential as drug targets in inflammation and cancer. A keen focus is to understand the role of the fluid uptake pathway, macropinocytosis, in controlling inflammation, cancer and mucosal absorption.
Professor Stow has been awarded multiple career fellowships including from American Heart Association, Wellcome Trust and NHMRC. She has published >200 papers, cited over 15,500 times and she is the recipient of awards and honours, most recently including the 2019 President's Medal from the Australia and New Zealand Society for Cell and Developmental Biology. She is also academic head of IMB Microscopy, a world-class fluorescence microscopy and image analysis facility. Her research is funded by a variety of agencies and industry partnerships, in addition to NHMRC and ARC, including through the ARC Centre of Excellence in Quantum Biotechnology, QUBIC. The Stow lab work with national and international collaborators and welcome students and postdoctoral trainees to participate in their research. We value having a diverse, inclusive and supportive culture for research and celebrate the many diverse and wonderful successes of Stow lab alumni.
Body:Highlights
Professor Jennifer Stow is a molecular cell biologist. She has had a lifelong fascination with cells, the ‘ultimate factories’, and how they work. After being awarded a PhD from Monash University, and training at Yale University School of Medicine, her first faculty appointment was at Massachusetts General Hospital/Harvard Medical School.
Professor Stow is renowned for her research on protein trafficking which has revealed how proteins critical for inflammation and cancer are moved around inside cells or transported out of cells. The cell signalling pathways that regulate these processes are also investigated in her search for ways to combat disease. Advanced imaging of molecules in living cells provides Professor Stow’s group with a remarkable window into the sub cellular universe and a way to observe cell behaviour.
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Professor Matt Sweet
NHMRC Leadership Fellow - GL & Director of TrainingInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Matt Sweet is an NHMRC Leadership Fellow, Group Leader, and Director of Higher Degree Research (DHDR) at the Institute for Molecular Bioscience (IMB) at The University of Queensland, Brisbane, Australia. He was the founding Director of the IMB Centre for Inflammation and Disease Research (2014-2018), also serving as Deputy Head of the IMB Division of Cell Biology and Molecular Medicine during this period. Matt studies innate immunity, the body's danger sensing system that responds to infection, injury and dysregulated homeostasis, and the role of this system in health and disease. Matt's research team focuses on manipulating the innate immune system for the development of anti-infective and anti-inflammatory strategies. To do so, his lab characterizes the roles of specific innate immune pattern recognition receptors and their downstream signalling pathways/gene products in inflammatory disease processes, as well as in host responses to bacterial pathogens. He has authored >175 journal articles and book chapters, including in Science (2), Science Translational Medicine, Science Immunology, Nature Immunology, Nature Genetics, Nature Communications (4), PNAS USA (6) and Journal of Experimental Medicine (2), and his career publications have accrued >19,000 citations.
Biography
I was awarded a PhD (The University of Queensland) in 1996 for my research under the supervision of Prof David Hume into gene regulation in macrophages, immune cells with important roles in health and disease. I subsequently undertook a short postdoctoral position in the same laboratory, focusing on the activation of macrophages by pathogen products. I then embarked on a CJ Martin post-doctoral training fellowship with Prof Eddy Liew, FRS at the University of Glasgow in Scotland. Returning to The University of Queensland, I had a prominent role within the Cooperative Research Centre for Chronic Inflammatory Diseases (including as UQ node head from 2007-2008) and was appointed as a Group Leader at the IMB in 2007. I have continued fellowship support since this time, including as an ARC Future Fellow, an NHMRC Senior Research Fellow and an NHMRC Leadership Fellow (current, from 2021).
Key discoveries
CpG-containing DNA as an activator of innate immunity, and characterization of the receptor (TLR9) detecting this microbial component.
The IL-1 receptor family member ST2 as a critical regulator of innate immunity and inflammation.
Inflammatory and antimicrobial functions of histone deacetylase enzymes (HDACs) in macrophages.
Effects of the growth factor CSF-1 on inflammatory responses in macrophages.
Mechanisms responsible for divergence in TLR responses between human and mouse macrophages, as well as the functional consequences of such divergence.
TLR-inducible zinc toxicity as an antimicrobial weapon of macrophages and the identification of defects in this pathway in cystic fibrosis.
Host evasion strategies used by the bacterial pathogens Salmonella enterica serovar Typhimurium and uropathogenic E. coli.
SCIMP as a novel TLR adaptor that mediates TLR tyrosine phosphorylation and selective cytokine outputs.
Genes and pathways associated with the severity of chronic liver disease.
Molecular mechanisms controlling macrophage immunometabolism, as well as associated inflammatory and antimicrobial responses.
Anti-inflammatory and antibacterial activities of the metabolite ribulose-5-phosphate.
Research training
I have supervised or co-supervised 29 completed PhD students and 22 completed honours students, as well as 9 post-doctoral researchers. Many of my former staff and students continue to have active research careers around the world (USA, UK, Europe, Australia), including as independent laboratory heads. I currently supervise 5 PhD students in my laboratory, co-supervise 4 PhD students in other laboratories, and oversee the research activities of 2 post-doctoral researchers in my group. Current and former staff/students have received numerous fellowships and awards during their research careers (e.g. ARC DECRA, NHMRC CJ Martin fellowship, UQ post-doctoral fellowship, Smart State scholarship). I have also examined >25 PhD theses in the fields of innate immunity, inflammation and host defence.
Professional activities
I am an editorial board member of the Journal of Leukocyte Biology and Seminars in Cell & Developmental Biology, and have served as an editorial board member for several other journals in the past e.g. Immunology and Cell Biology. I have served on NHMRC project grant review panels in 2007, 2008, 2009, 2012 (as panel chair) and 2014, NHMRC Ideas panels in 2020 and 2024, NHMRC Investigator panels in 2021 and 2022, as well as a member of the NHMRC RGMS user reference group committee from 2010-2012. I acted as national representative for the Australasian Society of Immunology (ASI) Infection and Immunity special interest group from 2012-2017. At UQ, I served as chair of an animal ethics committee from 2013-2014, and co-organized the UQ Host-Pathogen interaction network from 2007-2010 (prior to the establishment of the Australian Infectious Diseases Research Centre). I am currently Director of Higher Degree by Research at IMB, overseeing HDR student recruitment and training.
I have made extensive contributions to conference organization in my discipline. I co-organized the national TLROZ2009 and TLROZ2012 conferences, I organized the first ever Australasian Society for Immunology (ASI) Infection and Immunity workshop (2009), was chair of the ASI Program Committee and co-organizer of the Infection and Immunity workshop for ASI2017, and I co-organized the annual IMB Inflammation Symposium (2014-2018). I also co-chaired the 2019 World Conference of Inflammation (Sydney, September 2019). In addition, I have been a member of the organizing committee for ASI2009, the 2014 International Cytokine and Interferon Society conference, the Lorne Infection and Immunity conference (2014-2020), and the Brisbane Immunology Group annual meeting (2008 to the present).
Body:Highlights
Professor Matt Sweet uses techniques in immunology, cell biology and biochemistry to understand how the innate immune system functions in health and disease. His research focuses on characterizing genes and pathways in macrophages that either drive inflammation or are involved in the clearance of bacterial pathogens. The ultimate aim of his research is to devise strategies to manipulate the innate immune system to limit pathological inflammation and/or unleash its power against infections caused by antibiotic-resistant bacteria.
During his career, he has discovered mechanisms by which specific pathogen products activate macrophages; identified regulatory mechanisms controlling innate immune activation and inflammation; defined roles for histone deacetylase enzymes in infection and inflammation; elucidated antimicrobial responses used by macrophages to destroy bacteria, as well as mechanisms used by bacterial pathogens such as Salmonella and uropathogenic E. coli to subvert these responses; and identified molecular mechanisms by which immune cells use immunometabolism to drive inflammation and combat infections.
Professor Matt Sweet completed his PhD in 1996 at The University of Queensland, and then undertook a CJ Martin postdoctoral training fellowship at the University of Glasgow, before returning to Australia. He is currently an NHMRC Leadership Fellow at the Institute for Molecular Bioscience. He has authored >170 journal articles and book chapters, including publications in Science (x2), Science Immunology, Science Translational Medicine, Nature Immunology, Nature Genetics, Nature Communications (x3), Journal of Experimental Medicine (x2) and PNAS (x5). Professor Sweet currently serves on the editorial boards of several international journals including Journal of Leukocyte Biology and Seminars in Cell and Developmental Biology.
Professor Sweet has served as the Director of Training for IMB since 2021, overseeing PhD and Masters student recruitment and training. He has a strong focus on research culture and on delivering excellence in HDR student training and development. Professor Sweet has supervised/co-supervised more than 35 PhD students and more than 20 Honours students, and his former students have leading roles in Academia, Industry, and Government. He has won inaugural prizes from the Society for Leukocyte Biology (2021) and IMB (2016) for mentorship and leadership.
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Dr Mel White
Senior Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Dr Melanie White heads the Dynamics of Morphogenesis Lab at the Institute for Molecular Bioscience (IMB), University of Queensland and is an ARC Future Fellow. She completed a PhD in Neuroscience at University College London followed by postdoctoral research at The University of Edinburgh. During this time Mel engineered viruses to modulate gene expression in the brain to investigate neuronal function and as a therapeutic approach for neurodegenerative disease. Her work was published in Neuron and PNAS, featured in Nature Reviews Neuroscience and received extensive international media coverage (including the BBC and The Guardian).
In 2012 Mel switched fields to apply quantitative imaging in developmental biology. Her work revealed key mechanisms driving the earliest morphogenetic events in mammalian embryogenesis and was published in Cell, Science, Nature Cell Biology, Developmental Cell and Nature Protocols. Her research was featured on the cover of multiple journals including Cell and she was awarded the inaugural American Society for Cell Biology Porter Prize for Research Excellence (2018).
In 2020, Mel joined the IMB where she will combine her passion for neuroscience and developmental biology to investigate the dynamics of neural tube morphogenesis.
Research overview
The brain and the spinal cord control most of the functions of the body and the mind, yet the dynamics of how they first form is poorly understood. Both structures arise from a common precursor, the neural tube, which forms very early in embryonic development. To generate the forces that sculpt and shape the neural tube, changes in cellular architecture must be tightly coordinated in space and time. These morphological rearrangements occur concurrently with biochemical signalling pathways that specify early neural cell fates.
Our research aims to understand how cellular properties and transcriptional regulators interact with mechanical forces in real time to direct vertebrate neural tube formation and neural cell fate specification. We study the dynamics of neural tube formation by applying advanced imaging technologies in transgenic avian models and human stem cell models.
Body:Highlights
The use of high-spatiotemporal resolution live imaging has enabled us to discover and characterize new cellular structures essential for early embryo development. Firstly, we revealed the existence of long filopodia that form in some cells of the preimplantation mouse embryo and stretch out over their neighbors to facilitate the crucial process of embryo compaction (Nature Cell Biology, 2013). I also contributed to work characterizing a non-centrosomal microtubule organising centre that directs intracellular transport of adhesion molecules in the embryo (Science, 2017). Most recently, I discovered rings of actin filaments that form on apical cell surfaces of the mouse embryo and expand to the cell junctions just prior to blastocyst formation (Cell, 2018). We showed that coupling of these rings to the junctions triggers a tension-dependent zippering process that seals the embryo and allows expansion of the first cavity.
The development of an embryo requires a series of cell fate decisions to produce all the future cells of the body and extraembryonic tissues. Deciphering the mechanisms controlling cell fate determination is important not only to understand embryonic development, but also to provide advances in stem cell reprograming and regenerative medicine. My research has provided important insights into when and how cell fate bias first arises in the embryo and the mechanisms that drive the physical separation of the first cell lineages. By applying fluorescence correlation spectroscopy in the living embryo, we measured the binding dynamics of fate-specifying transcription factors (TF) in individual cells and revealed how differences in histone methylation affect TF dynamics to bias cell fate (Cell, 2016). Using 4D cell segmentation and computational tracking and laser-based ablations, we demonstrated that subcellular heterogeneities in tensile forces drive the first spatial segregation of cells in the embryo (Developmental Cell, 2015).
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Professor Alpha Yap
Professor and ARC Laureate FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:My group studies the role of cadherin cell adhesion molecules in morphogenesis and tumor development. E-cadherin is a key mediator of cell-cell recognition. It participates in tissue patterning and its dysfunction contributes to tumor progression and invasion.
Associate Professor Yap is the group leader for Cadherin cell adhesion molecules, Epithelial morphogenesis & Cell locomotion research at the IMB.
Body:Highlights
Professor Alpha Yap is a cell biologist. After training in Internal Medicine, Endocrinology and Cell Physiology, he undertook postdoctoral research with Barry Gumbiner at Memorial Sloan-Kettering Cancer Center (New York) before returning to Australia to establish his independent research group.
His research is at the leading edge of a rapidly developing field of science called mechanobiology. Mechanobiology explores how mechanical forces influence biology. Professor Yap is particularly interested in understanding how cells communicate by exerting force upon one another.
Collaborating across disciplines with colleagues from physics, developmental biology and mathematics, his research group has been instrumental in discovering how mechanical forces are generated, and sensed, to coordinate cell behaviour in tissues. Focusing on the epithelial tissues that are the major barriers of the body, Professor Yap believes that their cells monitor force to detect changes in the health of the tissue. This has important implications for understanding diseases such as cancer and inflammation.
Professor Yap currently serves on the editorial boards of several major international journals, amongst them Developmental Cell, Current Biology and Molecular Biology of the Cell.
He was the recipient of the 2013 President’s Medal of the Australia and New Zealand Society for Cell and Developmental Biology and is a Principal Research Fellow of the National Health and Medical Research Council of Australia.
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Professor David Fairlie
Director, Centre for Drug DiscoveryNHMRC Leadership Fellow and Group Leader & Centre Director of Institute for Molecular BioscienceInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Professor Fairlie is an NHMRC Research Investigator Fellow (Level 3) (2022-present), a Node Leader of the ARC Centre of Excellence for Innovations in Peptide Protein Science, one of four Centre Directors and former Head of the Division of Chemistry of Structural Biology at the Institute for Molecular Bioscience (since 2009), and an Affiliate Professor of the School of Chemistry and Molecular Biosciences. He was previously an NHMRC Senior Principal Research Fellow (2012-2021), a Node Leader at the ARC Centre of Excellence in Advanced Molecular Imaging (2014-2021), an ARC Federation Fellow (2006-2011), an ARC Professorial Fellow (2002-2006), and Scientific Director and Chief Scientific Officer of a startup company. He undertook postdoctoral studies at Stanford University and University of Toronto, postgraduate studies at Australian National University and University of New South Wales, and undergraduate studies at University of Adelaide.
His research group works across the disciplines of chemistry (synthesis, structure, reaction mechanisms), biochemistry (enzyme inhibitors, protein-protein interactions, GPCRs, transcription factors), immunology (innate immune cells in health and disease, mucosal T cells), and pharmacology (molecular pharmacology and human cell signalling, experimental pharmacology in rodent models of human diseases). He has published over 480 scientific journal articles in high impact chemistry journals (e.g. Chem Rev, Acc Chem Res, J Am Chem Soc, Angew Chem Int Edit, Chem Sci, J Med Chem, Org Lett, J Org Chem) and biology journals (e.g. Nature, Science, Nat Rev Endocrinol, Mol Cancer, Immunity, Nature Immunology, Science Immunology, Am J Resp Crit Care Med, J Hepatol, Trends Immunol, Mol Neurodegen, Adv Drug Deliv Rev, Nature Communications, Trends Pharmacol Sci, J Exp Med, J Clin Invest, Kidney Int, Arthritis & Rheum, Science Advances, Pharmacol Ther, Cancer Res, Proc Natl Acad Sci USA, Dev Cell, Curr Biol, J Cell Biol, Cell Reports, PloS Biol, Br J Pharmacol, JCI Insight, Diabetes, Mucosal Immunol, etc). He has been a Highly Cited Researcher (Clarivate Analytics), with over 37,000 citations and 113 publications with over 100 citations (Google Scholar), and has collaborated with many of the world's largest pharmaceutical and biotechnology companies.
Body:Highlights
Professor David Fairlie is internationally known for his research contributions in the fields of medicinal chemistry, organic chemistry, biological chemistry and in several disciplines in biology (pharmacology, virology, immunology, neurobiology, biochemistry). He has had strong research programs in chemistry, biochemistry and pharmacology continuously funded by the Australian Research Council (ARC) since 1991 and the National Health and Medical Research Council (NHMRC) since 1995. He was awarded prestigious fellowships from the ARC, in the form of an Australian Professorial Fellowship (2002-2006) and an Australian Federation Fellowship (2006-2011), and from the NHMRC, in the form of a Senior Principal Research Fellowship (2012-2016 and 2017-2021). He has held numerous research grants in chemistry, biochemistry, pharmacology, virology, immunology, parasitology, neurobiology and oncology; including 15 multimillion dollar grants from industry and governments. He has served on academic and industry advisory panels, company boards, and research grant panels both in Australia and overseas. He collaborates with some of the world's largest pharmaceutical companies.
Professor Fairlie has >300 publications (h index >60; >14,000 citations; >35 cites per article; >30 articles >100 citations) and presents 5-10 invited plenary and keynote lectures around the world each year. He is also well known in the international pharmaceutical arena, having consulted to multiple big pharma on protease inhibitors, GPCR modulators, protein and peptide mimics, drug design and discovery, and pharmacology. He has been involved in four startup companies in Australia and the USA.
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Professor Rob Capon
Professorial Research Fellow - GLInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:My research group specializes in the detection, isolation, identification and evaluation of biologically active small molecules from Nature (natural products). We acquire valuable knowledge on how and why natural products are made, and apply this knowledge to better understand living systems, and solve important scientific and societal challenges.
To achieve these goals we have established specialist capabilities that extend across;
Microbiology – the isolation, characterization and cultivation of bacterial and fungal strains.
Chemistry – the extraction and fractionation of natural extracts, the purification, chemical and spectroscopic characterization, and structure elucidation of natural products, and the use of synthetic and medicinal chemistry to explore bioactive scaffolds.
Biology – to evaluate extracts and natural products against an array of bioassays, leading to new human pharmaceuticals that target such indications as infectious and neurodegenerative diseases, cancer, pain and epilepsy, as well as new animal health products and new crop protection agents.
Body:Highlights
Professor Rob Capon is a natural products chemist. He is a master of interrogating the molecular diversity of the natural world and applying it to society’s most pressing social and economic problems. He goes out into the natural world, detects biologically active molecules from living things, then isolates, identifies and evaluates them. Most importantly, he is committed to finding a use for them. His mantra for commercialization is ‘forced failure', in other words, “if you can break it, you won’t make it”. With the enormous untapped potential of natural products, he doesn’t like to waste time. He works quickly to “break or make” hypotheses, to focus resources on those molecules that are worthy of investment.
Professor Capon leads a group of researchers that are responsible for assembling a world-class molecule library, which along with the Australian collection of microbes housed at IMB, is used to discover new drugs. For Professor Capon, the most rewarding aspect of his work is the ability to dip into the molecular resource in the Australian environment, extract the chemistry and use it to improve our understanding of the natural world, and solve important problems.
He applies his research methodology to human health, animal health, crop protection, and environmental protection. He collaborates broadly in each of these areas.
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Dr Rosemary Cater
Senior Research Fellow & Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Rosemary Cater was recently recruited to UQ's Institute for Molecular Bioscience as a Group Leader and ARC DECRA Fellow. She utilizes structural biology, membrane protein biochemistry, and biophysics to understand some of the brain's most elusive yet important proteins. The overarching goal of the Cater Lab is to understand molecular mechanisms of transport at the blood-brain barrier.
Dr. Cater was awarded her PhD in 2017 from the University of Sydney, and from 2017-2023 she was a Post-Doctoral Fellow in the laboratory of Prof. Filippo Mancia at Columbia University, New York, USA. Here she used single-particle cryo-electron microscopy and antigen-binding technology to determine structures of small membrane proteins.
Highlights of her career thus far include:
- She has been awarded an ARC DECRA, an NIH K99/R00 career transition award.
- She received a 2022 Blavatnik Regional Finalist Award in Chemistry – a highly competitive award for outstanding post-doctoral research presented at the New York Academy of Sciences Annual Gala.
- She was selected as one was 1 of 120 young leaders invited from 46 countries to the 2022 Science and Technology in Society Forum (Kyoto) to discuss humanity's global challenges with politicians, CEOs, and Nobel Laureates.
- She was appointed as one of twelve Simons Society Fellows (2018-2022) – one of the USA's most competitive post-doctoral fellowships, founded in New York by billionaire philanthropist Jim Simons.
- She received a Robin Anders Young Investigator Award at the Lorne Protein Structure and Function 2020 Meeting – one of Australia's most competitive awards for early-career protein scientists.
Professor Glenn King
NHMRC Leadership Fellow and Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Body:Highlights
Professor Glenn King is a biochemist and structural biologist whose expertise lies in translating venom-derived peptides into human drugs and bioinsecticides. His lab maintains the most extensive collection of venoms in the world, which includes venoms from more than 600 species of venomous spiders, scorpions, centipedes and assassin bugs.
Professor King’s primary focus is on the development of drugs to treat three pervasive nervous system disorders: chronic pain, epilepsy, and stroke. His lab is working closely with several pharmaceutical companies to develop drugs for clinical use.
Professor King has also charted new territory in the field of agriculture by developing venom peptides as eco-friendly bioinsecticides. Vestaron Corporation, the company that he founded, will begin selling these bioinsecticides in the U.S. market in 2017.
Mentorship is important to Professor King, and he is enthusiastically committed to training the next generation of biological scientists. To date he has trained 30 PhD students and 24 postdoctoral scientists, with 10 lab alumni having gone on to independent academic positions.
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Professor David Craik
UQ Laureate Fellow - GLInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:David Craik (AO, FRS, FAA) is in the Centre for Chemistry and Drug Discovery at the Institute for Molecular Bioscience, The University of Queensland, Australia. He discovered the cyclotide family of circular proteins and has characterized the structures of many animal toxins including conotoxins from cone snail venoms. He heads a research team of 35 researchers whose current work focuses on applications of circular proteins, drugs in plants, toxins and NMR in drug design.
He is author of over 810 scientific papers, including 14 in Nature publications (Nature/Nature Communications/Nature Neuoroscience/Nature Structural Biology/Nature Chemical Biology/Nature Chemistry/Scientific Reports/Nature Protocols, 1 in Science, 12 in PNAS, 9 in JACS, 3 in Chemical Reviews, and 16 in Angewandte Chemie. He has been elected as a Fellow of the Royal Society and a Fellow of the Australian Academy of Science, appointed as an Officer (AO) of the Order of Australia and has received numerous awards for his research, including the Ralph F. Hirschmann Award from the American Chemical Society (2011), Ramaciotti Medal for Excellence in Biomedical Research (2014), GlaxoSmithKline Award for Research Excellence (2014), the Vincent du Vigneaud Award from the American Peptide Society (2015),the FAOBMB Award for Research Excellence (2015) and the Cathay Award from the Chinese Peptide Society (2018). He received the Australian Academy of Science David Craig Medal in 2023. He is an Honorary Professor of Jinan University, Guangzhou and has an Honorary Doctorate from Kalmar University in Sweden.
Biography
David Craik obtained his PhD in organic chemistry from La Trobe University in Melbourne, Australia and undertook postdoctoral studies at Florida State and Syracuse Universities before taking up a lectureship at the Victorian College of Pharmacy in 1983. He was appointed Professor of Medicinal Chemistry and Head of School in 1988. He moved to University of Queensland in 1995 to set up a new biomolecular NMR, held an Australian Research Council Laureate Fellow (2015-2020) and is currently a NHMRC Fellow, as well as Director of the Australian Research Council Centre of Excellence in Peptide and Protein Science.
Key Discoveries
David Craik has made discoveries of new classes of proteins, generated new knowledge on their structure and function, and used this information to design and chemically re-engineer new classes of protein-based drug leads and agricultural pest control agents. In particular, his major achievements are:
- the discovery of cyclotides, the largest known family of circular proteins. As well as a circular backbone, cyclotides contain a knotted arrangement of cross-linking disulfide bonds, making them remarkably stable. His discovery of these proteins was sparked in part from anecdotal reports of medicinal practices in Africa where women make a tea from the plant Oldenlandia affinis by boiling it in water and sipping it during labour to accelerate child birth. He determined the structure of the bioactive component of this medicinal tea and found that it had an unprecedented head-to-tail cyclic peptide backbone combined with a cystine knot.
- the first structural and functional characterizations of prototypic circular proteins in higher organisms - Professor Craik was one of the first to recognize that other families of ribosomally synthesized cyclic peptides exist. As examples from bacteria and animals emerged, Professor Craik was at the forefront of their structural characterization, reporting the first structures of theta-defensins from animals and the threaded lasso peptide microcin J25 from bacteria, as well as new examples of cyclic peptides from plants.
- the development of artificially cyclized peptide toxins as drug leads – he developed an orally active peptide that is 100 times more potent than the leading clinically used drug for neuropathic pain.
Research Training
Professor Craik has trained more than 70 PhD students. He was awarded UQ's Research Supervision Excellence Award in 2007 on the basis of his mentoring and innovations in postgraduate training, including his "writing retreats" to mentor students and postdocs on science writing skills. He received the Institute for Molecular Bioscience Individual Leadership Award in 2019. He was awarded an honorary doctorate from Kalmar University, Sweden for his contributions to international student exchange programs, and is an Honorary Professor of Jinan University, Guangzhou.
Professional Activities
Professor Craik founded and chaired the 1st, 2nd and 3rd International Conferences on Circular Proteins (2009, 2012 and 2015) and was on the Scientific Program Committee for ISMAR 2021. He is on the Boards of six international journals, including Angewandte Chemie, ACS Chemical Biology, Chemical Biology and Drug Design, and ChemBioChem. He was on the Council of the American Peptide Society (2015-2021). He was the director two Brisbane-based biotech companies. He is on the Scientific Advisory Boards of James Cook University's Centre for Biodiscovery and Molecular Development of Therapeutics (BMDT), the University of Wollongong's Illawara Health and Medical Research Institute (IHMRI) and Enzytag. He conceived and supports two publicly accessible databases - Cybase on circular proteins (www.cybase.org.au), and conotoxins (www.conoserver.org).
Body:Highlights
Professor David Craik is a structural biologist who travels the world discovering new molecules in plants and animals. His area of expertise is peptides (mini-proteins). He is looking for peptides that could be effective treatments for a range of diseases or have useful applications as environmentally friendly agri-chemicals. He particularly likes to discover something in nature and then use molecular design to improve on it.
Professor Craik is best known for discovering a family of peptides with a unique circular structure, which he aptly named cyclotides. Cyclotides are super stable, which makes them desirable as drug leads. By re-engineering the structure of other peptides to mimic cyclotides, he is making potent and specific peptides orally active – creating the perfect drug. He is known internationally as the founder of this field of research.
He was the first person to take a peptide from a cone snail, a natural conotoxin, and re-engineer its structure to make it cyclic. By improving the strength of the molecule, he created a natural painkiller 100 times stronger than the current market leader gabapentin, and potentially with lower side effects. The drug is currently showing great promise in animal trials. This natural painkiller is the first time an orally active drug has resulted from an animal venom. In other applications Professor Craik’s methodology led to the commercialisation of an environmentally friendly insecticide.
Professor Craik is known internationally for his work in peptide-based drug design and sought after as a conference speaker on the topic.
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Professor Ben Hankamer
Professorial Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Centre for Solar Biotechnology: Prof Ben Hankamer is the founding director of the Solar Biofuels Consortium (2007) and Centre for Solar Biotechnology (2016) which is focused on developing next generation microalgae systems. These systems are designed to tap into the huge energy resource of the sun (>2300x global energy demand) and capture CO2 to produce a wide-range of products. These include solar fuels (e.g. H2 from water, oil, methane and ethanol), foods (e.g. health foods) and high value products (e.g. vaccines produced in algae). Microalgae systems also support important eco-services such as water purification and CO2 sequestration. The Centre is being launched in 2016/2017 and includes approximately 30 teams with skills ranging from genome sequencing through to demonstration systems optimsation and accompanying techno-economis and life cycle analysis. The Centre teams have worked extensively with industry.
Structural Biology: The photosynthetic machinery is the biological interface of microalgae that taps into the huge energy resource of the sun, powers the biosphere and produces the atmospheric oxygen that supports life on Earth. My team uses high resolution single particle analysis and electron tomography to solve the intricate 3D architecture of the photosynthetic machinery to enable structure guided design of high efficiency microalgae cell lines and advanced artificial solar fuel systems.
Body:Highlights
Professor Ben Hankamer trained in applied biochemistry in Liverpool before exploring his interest in the development of environmental solutions to re-green deserts at the Desert Research Centre in Israel.
He has a keen interest in environmental protection and climate change. He completed his Masters in plant biotechnology at Wye College, London University before completing his PhD in structural biology. He wanted to understand how plants catch the sunlight and CO2 and use these to produce the food, fuel and atmospheric oxygen which supports life on Earth. He discovered his research passion listening to a talk at the Royal Society in London on using algae to make hydrogen fuel from light and water, and it has been a major research focus ever since.
The Centre for Solar Biotechnology that he now directs develops advanced algae technologies for the production fuels, foods as well as a range of high value products including peptide therapeutics.
He was a recipient of an Eisenhower Fellowship, which allowed him to travel to the United States for seven weeks and engage with 2-3 industry partners per day. He is now the Director of the Centre for Solar Biotechnology at UQ's Institute for Molecular Bioscience.
His research focus is solar biotechnology and structural biology. He is designing high-efficiency microalgae systems to capture solar energy and CO2 to make a range of products including food and fuel. By expanding our photosynthetic capacity on non-arable land, he believes we can harness the Sun's energy to fuel the world ‘s future energy needs.
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Emeritus Professor Richard Lewis
Emeritus ProfessorInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Body:Highlights
A fascination for chemistry, marine biology and zoology led Professor Richard Lewis to become expert in analyzing and characterizing venoms. He is best known for using mass spectroscopy and novel bioassays to characterise conotoxins, which are small venom peptides from predatory marine snails, and using molecular pharmacology to enhance molecules for drug development.
The focus of Professor Lewis’s research is discovering and developing new treatments for chronic pain. Several conotoxins discovered by his research team have been taken into the clinic, including Xen2174 for severe pain.
The potential to change people’s lives is a key motivator for Professor Lewis. By making discoveries on the scientific frontier, he hopes to change the landscape for further research, and whenever possible help deliver better treatments for chronic pain sufferers.
Professor Lewis is Director of IMB’s Centre for Pain Research, and leader of a Program Grant in Pain Research from the NHMRC.
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Associate Professor Mark Smythe
Principal Research Fellow - GLInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Body:Highlights
Associate Professor Mark Smythe is a medicinal chemist. His expertise lies in transforming interesting molecules into high-value medicines.
His methodology for translating academic discoveries into commercially viable companies has achieved great success. He founded biotech company Protagonist Therapeutics in 2001, which is now a publicly listed company with several compounds in human clinical trials and several others sold to pharmaceutical partners. He and his team worked for 15 years to develop an approach to replace injectable drugs with pills. They took high potency, highly selective peptides that are traditionally broken down quickly by the body, and made them stronger. So, diseases that used to require ‘big-molecule’ injections we can now treat with a ‘constrained peptide’ pill. This has several advantages to the patients and addresses unmet medical needs of various diseases
Associate Professor Smythe has always had a focus on applied research, making things. He studied a Bachelor of Science with Honours in Townsville. He wanted a PhD that was applied, so he took at position at Biota with a focus on Influenza. After working in the US, he accepted a position at the then 3D Centre in Queensland, now the Institute for Molecular Bioscience (IMB). At IMB he uses his expertise to translate discoveries into new drug candidates.
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Professor Irina Vetter
NHMRC Leadership Fellow - Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:I am an NHMRC Leadership Fellow with joint apointments at the Institute for Molecular Bioscience (IMB) and School of Pharmacy, UQ. My research interests lie in the fields of peripheral pain mechanisms, target identification and analgesic drug discovery. I investigate the contribution of ion channels to sensory neuronal physiology using highly subtype-selective toxins isolated from venomous animals with the aim to develop novel analgesics with improved efficacy and tolerability.
Body:Highlights
Associate Professor Irina Vetter has a strong background in neuropharmacology, pain models, toxinology and high-throughput screening. Currently her primary research interests lie in the fields of peripheral pain mechanisms, target identification, biodiscovery of venom peptide ion channel modulators and analgesic drug discovery.
Associate Professor Vetter has always been fascinated by how we perceive the world around us, in particular, the role of sensory neurons in the body. Sensory neurons are an intricate network of nerve cells that convert external stimuli from the environment into messages within the body, like pain. Her research is demystifying the different pathways that contribute to pain in various disease states. She is using biomedical research and pharmacology to develop pain treatments from venoms and toxins.
Associate Professor Vetter is an ARC Future Fellow and Deputy Director of the Centre for Pain Research at The University of Queensland. She is a registered pharmacist and has worked in hospital as well as community pharmacy. She obtained her PhD in 2007 from the School of Pharmacy, and conducted postdoctoral studies as an NHMRC postdoctoral fellow under Prof Geoffrey Goodhill at the Queensland Brain Institute and under Prof Richard J Lewis at the Institute for Molecular Bioscience in the areas of axon guidance and venom peptide pharmacology
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Dr Conan Wang
ARC Future Fellow and Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:I lead the Technology-Driven Drug Discovery (Tech3D) Group at the Institute for Molecular Bioscience, UQ. We believe that the key to solving some of our world's biggest challenges, whether that be in medicine or agriculture, relies on the ability to precision engineer molecules at will. My group harnesses three technological pillars to engineer peptides and proteins, which are computational biology, molecular libraries, and nanotechnology. We aspire to design better drugs, creating next generation biotechnological agents that have real impact. These could be new cancer drugs that harness the body's immune system or new insecticides that are environmentally friendly. In these pursuits, we value advancement, fun, balance, respect, fairness, and integrity.
I have been involved in peptide and protein research for over two decades, and am highly experienced in bioinformatics, chemistry, structural characterization, biophysics, and biochemistry. I trained with experts in peptide and protein characterization: an Honours project with Professor Garry King at the University of New South Wales, Sydney, Australia (2004), an APA scholarship with Professor David Craik at the University of Queensland Institute for Molecular Bioscience, Brisbane, Australia (2005-2009) and a NHMRC fellowship with Professor Mingjie Zhang at the Hong Kong University of Science and Technology, Hong Kong, China (2009-2011) and A/Professor Andreas Hofmann at Griffith University Eskitis Institute, Brisbane, Australia (2011-2012). I returned to the University of Queensland in 2012 to join an industry partnership funded by an ARC linkage grant. I currently hold an ARC Future Fellowship and am responsible for a team of research officers, assistants and postgraduate students.
My research output has been recognised by >30 prizes and awards for leadership, research translation and fundamental research excellence, as well as numerous invitations to speak at academic and pharmaceutical conferences. I have over 100 publications and have been cited by researchers from across the world.
Body:Professor Mark Schembri
Professorial Research Fellow & Group Leader & Centre Director of Institute for Molecular BioscienceInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Professor Mark Schembri is a prominent microbiologist with experience in combating the global health crisis presented by multi-drug resistant pathogens. Professor Schembri's expertise on the virulence of bacterial pathogens and his innovative analysis of biofilm formation aims to improve the outcomes of the >400 million individuals that suffer from urinary tract infections each year across the globe.
Through the application of genetic, genomic and functional studies on uropathogenic E. coli, Professor Schembri has identified targets to reduce the virulence of this pathogen, and will pursue the development of life-saving therapeutic and preventative advances with the assistance of NHMRC, MRFF and ARC grants. Professor Schembri has tracked the rapid emergence and global spread of a virulent, drug-resistant E. coli clone and used genome sequencing to understand its evolution and virulence.
Links: Professor Schembri collaborates with national and international research leaders, including in Denmark, where he was a lecturer. Professor Schembri has strong links with other international experts in his field, including at the Pasteur Institute and the Wellcome Trust Sanger Institute in Cambridge. His research collaborations also span lead groups at UQ and other top Australian institutes, including Griffith and La Trobe Universities.
Membership, Funding and patents: Since 2014, Professor Schembri has been awarded over $15 million in funding from competitive national research funding bodies. He holds provisional patents for the development of novel therapeutic agents and vaccine antigens. He is a Fellow of the American Academy of Microbiology, and is regularly invited to speak at international conferences in his field.
Awards and Communication: Professor Schembri was the recipient of the Frank Fenner Award (2010) and the ASM BacPath Oration Award (2019) for his outstanding original research contribution to the study of Infectious Disease. He was an Australian Research Council Future Fellow (2011-2015) a National Health and Medical Research Council Senior Research Fellow (2016-2020). Professor Schembri is the author of >240 peer-reviewed research manuscripts. He is President of the Australian Society for Microbiology (2022-2026).
Professor Mark Blaskovich
Director of Translation, IMBProfessorial Research Fellow & GL & IMB Director of Translation of Institute for Molecular BioscienceInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Professor Mark Blaskovich is an antibiotic hunter and Director of Translation at the Institute for Molecular Bioscience at The University of Queensland. He is co-founder and former Director of the Centre for Superbug Solutions at IMB.
A medicinal chemist with 15 years of industrial drug development experience prior to his academic career, Mark has been developing new antibiotics to treat drug resistant pathogens and using modified antibiotics to detect bacterial infections. He is a co-founder of the Community for Open Antimicrobial Drug Discovery, a global antibiotic discovery initiative, and has led a number of UQ-industry collaborations focused on antibiotic development. An inventor on eleven patent families, Mark has developed drugs in clinical trials, published more than eighty research articles, and received over $10m in grant funding.
Professor Denise Doolan
Deputy Director (Research)Institute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Professor Denise Doolan is Director of Research at the Institute for Molecular Bioscience. She joined IMB in 2022 and was previously Deputy Director of the Australian Institute of Tropical Health and Medicine, and Director of the JCU Centre for Molecular Therapeutics, at James Cook University.
She is a molecular immunologist, working on the development of vaccines, diagnostics and host-directed therapeutics for infectious and chronic diseases that impact global public health, with a particular focus on malaria. Her cross-disciplinary research program spans host-pathogen immunity, antigen discovery, vaccine engineering, and biomarker discovery. A particular interest is the application of state-of-the-art genome-based technologies and human models of disease system to identify novel targets for intervention against disease or that predict risk of disease.
She is a recognized world expert in malaria immunology, vaccinology, and omic-based approaches for therapeutic and diagnostic development. She has been honoured as a Fellow of the International Society for Vaccines (2017) and a Fellow of the Australian Society of Parasitology (2019) in recognition of her leadership and contribution to health and medical science in Australia and internationally.
Professor Doolan serves on a number of Executive Boards and Advisory Boards. Most recently, she has been elected as President of the International Society for Vaccines (2021-2023), and has been appointed to the Federal Government's Australian Medical Research Advisory Board (AMRAB; 2021-2026) to provide specialist insights into Australia's medical research and innovation priorities.
Body:Professor Denise Doolan is Director of Research at the Institute for Molecular Bioscience. She joined IMB in 2022 and was previously Deputy Director of the Australian Institute of Tropical Health and Medicine, and Director of the JCU Centre for Molecular Therapeutics, at James Cook University.
She is a molecular immunologist, working on the development of vaccines, diagnostics and host-directed therapeutics for infectious and chronic diseases that impact global public health, with a particular focus on malaria. Her cross-disciplinary research program spans host-pathogen immunity, antigen discovery, vaccine engineering, and biomarker discovery. A particular interest is the application of state-of-the-art genome-based technologies and human models of disease system to identify novel targets for intervention against disease or that predict risk of disease.
She is a recognized world expert in malaria immunology, vaccinology, and omic-based approaches for therapeutic and diagnostic development. She has been honoured as a Fellow of the International Society for Vaccines (2017) and a Fellow of the Australian Society of Parasitology (2019) in recognition of her leadership and contribution to health and medical science in Australia and internationally.
Professor Doolan serves on a number of Executive Boards and Advisory Boards. Most recently, she has been elected as President of the International Society for Vaccines (2021-2023), and has been appointed to the Federal Government’s Australian Medical Research Advisory Board (AMRAB; 2021-2026) to provide specialist insights into Australia’s medical research and innovation priorities.
Professor Ian Henderson
Institute DirectorInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Body:Professor Ian Henderson is the Executive Director of the Institute for Molecular Bioscience at The University of Queensland. In this role, he is responsible for developing the research strategy of an established, world-leading research institute with over 500 staff and students, fostering collaboration and raising the profile of the Institute and University internationally.
Prior to becoming Executive Director, he was Deputy Director (Research) at IMB. Professor Henderson was previously the Director of the Institute of Microbiology and Infection at University of Birmingham from 2015-2018.
He is a Professor of Microbial Biology who completed his Bachelor of Science (Hons) at University College Dublin and his PhD at Trinity College Dublin. He also holds a Postgraduate Certificate in Teaching and Learning in Higher Education from The University of Birmingham. Professor Henderson is a Fellow of the Royal Society of Biology.
Professor Henderson's research interests focus on the cell surface of bacteria. This focus is based on the philosophy that the bacterial cell surface offers a rich source of molecules, which can be utilised and adapted to diagnose, prevent or treat infections that can lead to life-threatening disease in humans and animals.
His research group has three major themes exploiting a range of experimental techniques to address fundamental questions in the biology of host-pathogen interactions:
(1) Using biochemical and biophysical methodologies to study protein secretion in Gram negative bacteria
(2) using molecular biology, cellular biology and immunological methodologies to study the roles outer membrane proteins play in the interaction of pathogens with their hosts
(3) using genetic, structural, biochemical and biophysical techniques to understand the molecular basis for the integrity of the Gram-negative outer membrane.Professor Henderson has published over 150 research papers, reviews and book chapters. He has an H-index of 62, and his publications have been cited over 15,000 times, with an average of 100 citations per paper.
Professor Waldemar Vollmer
Professorial Research Fellow & Group Leader - Bacteriology DiscoveryInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Overview
Professor Waldemar Vollmer is a microbiologist working on the structure and biogenesis of the bacterial cell wall in various model bacteria and a range of pathogenic and environmental bacteria. He is particularly interested in how bacteria enlarge their cell wall when they grow and divide, and how antibiotics inhibit cell wall synthesis to kill bacteria. Antimicrobial resistance (AMR) is a global problem that is predicted to claim 10 million lives annually by the year 2050 if no new antibiotics are developed. Currently the pipeline of antibiotic development is almost empty and mostly limited to slightly modified versions to existing antibiotics. Professor Vollmer addresses the problem of AMR by generating tailored assays for the development of novel antibiotics that target AMR bacteria.
Collaborations: Professor Vollmer collaborates world-wide with more than 50 researchers at top national and international institutions on cell wall topics in over 30 different bacteria. These topics include: structure and composition of the cell wall and its role in maintaining cell morphology; molecular mechanisms of cell envelope biogenesis; role of new cell wall modifying enzymes in the interaction of pathogenic bacteria with components of the immune system; mechanisms of antibiotic resistance and targeting of cell wall biogenesis by new antibiotics.
Funding and Publications: Professor Vollmer has been awarded more than $15 million funding from research councils and charities in Germany, UK, Europe and USA. He has published more than 200 articles in international journals and has been recognised as a Highly Cited Researcher in Microbiology.
Honours and Awards: Professor Vollmer has been elected to Fellow of the American Academy of Microbiology (2014) and European Academy of Microbiology (2018). He received the annual Academic Distinction Awards from the Vice Chancellor of Newcastle University (2014), has been awarded a Distinguished Scientist Visiting Scholarships at Ben-Gurion University of the Negev (Israel, 2012) and a Visiting Professorship at the University of Cagliari (Italy, 2015), and won a Wellcome Trust Senior Investigator Award (2014). He has co-organised the 2018 Gordon Conference (GRC) "Bacterial Cell Surfaces" (Mt Snow, USA) and the 2016 EMBO Workshop "Bacterial Cell Division: Orchestrating the Ring Cycle" (Prague, Czech Republic).
Short Biography: Prof Waldemar Vollmer has studied chemistry at the University of Applied Sciences in Reutlingen (Germany) and University of Basel (Switzerland). In 1998 he obtained a PhD degree (Dr.rer.nat.) from the University of Tübingen (Germany) for his work on cell wall synthesis in the model bacterium Escherichia coli undertaken at the Max Planck Institute for Developmental Biology. During his postdoctoral studies at the Rockefeller University (New York, USA) he discovered novel cell wall enzymes that are crucial for the virulence of the pathogenic bacterium Streptococcus pneumoiae. In 2003 he was appointed Assistant Professor at the University of Tübingen and moved 2007 to the Centre for Bacterial Cell Biology at Newcastle University (UK), where he worked as Professor of Bacterial Biochemistry on various bacterial cell wall topics in a range of different bacteria. Since April 2023 he is Professorial Research Fellow and Group Leader at the Centre for Superbug Solutions, Institute for Molecular Bioscience (IMB) at the University of Queensland.
Professor Mark Walker
Professorial Research Fellow & Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Body:Dr Brian Forde
Senior Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Brian Forde is a fellow in microbial bioinformatics and Advance Queensland Industry Research Fellow at the University of Queensland (UQ) Centre for Clinical Research (CCR). Brian was awarded a PhD from University College Cork, Ireland, in 2013 and developed his interest in bacterial genomics as a postdoctoral fellow at the UQ School of Chemistry and Molecular Biosciences (SCMB). Currently, his work is primarily focused on clinical microbial genomics, including: the evolution of antibiotic resistance, genomic epidemiology, genomic surveillance of Infectious Diseases and translating genomic research into clinical practice. Since 2017 he has been part of a multidisciplinary team, including researchers, infectious diseases clinicians and infection control professionals, leading the introduction of WGS to investigate hospital-acquired infection in Queensland (https://www.queenslandgenomics.org). In 2020, Brian was awarded Advance Queensland Industry Research Fellowship to explore the application of Artificial Intelligence to genomic surveillance and transmission dynamics.
Professor Naomi Wray
Director, Centre for Population and Disease GenomicsJoint AppointmentQueensland Brain InstituteProfessorial Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Naomi Wray is the Michael Davys Professor in the Department of Psychiatry, University of Oxford. She holds an appointment at the Institute for Molecular Bioscience (IMB) within the University of Queensland. She joined UQ Queensland Brain Institute in 2011 moving to the IMB in 2015. She was Head of the Centre for Population & Disease Genomics within IMB 2018-2023. Her Oxford appointment started in 2023.
Her research focuses on development and application of quantitative genetics and genomics methodologies across complex diseases, disorders and traits, but particularly psychiatric-related traits.
She is a National Health and Medical Research Council (NHMRC) Leadership Fellow, a Fellow of the Australian Academy of Science and a Fellow of the Australian Academy of Health and Medical Science. In 2020 she was awarded the NHMRC Elizabeth Blackburn Award for Leadership in Basic Science and the 2021 International Society of Psychiatric Genetics Ming Tsuang Lifetime Achievement Award. She is a Clarivate Highly Cited researcher.
She was Director of the Program in Complex Trait Genomics (PCTG) funded as an NHMRC Program Grant 2017-2022. She plays a key role in the International Psychiatric Genomics Consortium and established the sporadic ALS Australia systems genomics consortium (SALSA) funded by the MND Research Australia IceBucket Challenge and FightMND. She is a co-investigator on the Australian Genetics of Depression Study (AGDS) and is currently launching the AGDS-Cello project focussed on establishing a cell line resource from participants with a detailed history of anti-depressant use and response measures. She is part of an NHMRC Synergy (2023-2027) "Rhythms and blues: Personalising care for body clock dysfunction in mood disorders".
She is secretary of the International Society of Psychiatric Genetics, and is on the editorial advisory boards of JAMA Psychiatry, Neuron, Royal Society Open and Research Directions: Depression.
Professor David Evans
Professorial Research Fellow and Director, Centre for Population and Disease GenomicsInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:David Evans is an NHMRC Leadership Fellow and Professor of Statistical Genetics at the University of Queensland Institute for Molecular Bioscience. He is a winner of the NHMRC Marshall and Warren Award.
He completed his PhD in Statistical Genetics at the University of Queensland in 2003, before undertaking a four-year post-doctoral fellowship at the Wellcome Trust Centre for Human Genetics, University of Oxford where he worked as part of the The International HapMap Consortium and co-led the analysis of four diseases within the first Wellcome Trust Case Control Consortium. In 2007 he moved to take up a Senior Lecturer position at the University of Bristol where he led much of the genome-wide association studies work in the Avon Longitudinal Study of Parents and Children (ALSPAC). In 2013 he returned to take up a chair at the University of Queensland whilst continuing to lead an MRC Programme in statistical genetics at the University of Bristol.
His research interests include the genetic mapping of complex traits and diseases (including birthweight and other perinatal traits, osteoporosis, ankylosing spondylitis, sepsis, laterality) and the development of statistical methodologies in genetic epidemiology including approaches for gene mapping, individual risk prediction, causal modelling and dissecting the genetic architecture of complex traits. He has a particular interest in Mendelian randomization and has used it and other causal methods to investigate the Developmental Origins of Health and Disease (DOHaD)- the idea that adverse intrauterine exposures lead to increased risk of disease in later life.
He is Academic Codirector at the NIH funded International Workshop on Statistical Genetics Methods and is faculty on the European Programme in Educational Epidemiology.
He is Associate Editor at the International Journal of Epidemiology and Behavior Genetics journals.
Professor Grant Montgomery
Director, UQ Genome Innovation HubEmeritus Professor & Centre Director of Institute for Molecular BioscienceInstitute for Molecular BioscienceResearcher profile is public:0Supervisor:Body:Highlights
Professor Grant Montgomery uses genetic approaches to discover critical genes and pathways increasing risk for reproductive disorders. He applies state of the art genomic techniques to identify risk factors and understand how these genetic differences regulate gene expression and epigenetics to alter disease risk. The goal is to understand disease biology and help develop better methods for diagnosis and treatment.
A major focus is women’s health and the pathogenesis of endometriosis. Together with colleagues in Brisbane, he led a recent large international study on genetic risk factors for endometriosis which confirmed 14 regions of the genome are associated with the disease, including 5 novel regions. His research is now moving to functional studies to identify the target genes in each region and determine how changes in the regulation of these genes contribute to disease. Professor Montgomery has published the first examples of likely target genes for two regions.
He is also using genomic approaches to help understand environmental risk factors for this disease. Environmental risk factors may leave epigenetic signals on DNA that are associated with disease and he is part of an international study on global methylation analysis in endometriosis.
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Dr Allan McRae
Principal Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Dr Quan Nguyen
Senior Research FellowInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Dr Quan Nguyen is a Group Leader at the Institute for Molecular Bioscience (IMB), The University of Queensland. He is leading the Genomics and Machine Learning (GML) lab to study neuroinflammation and cancer-immune cells at single-cell resolution and within spatial morphological tissue context. His research interest is about revealing gene and cell regulators that determine the states of the complex cancer and neuronal ecosystems. Particularly, he is interested in quantifying cellular diversity and the dynamics of cell-cell interactions within the tissues to find ways to improve cancer diagnosis or cell-type specific treatments or the immunoinflammation responses that cause neuronal disease.
Using machine learning and genomic approaches, his group are integrating single-cell spatiotemporal sequencing data with tissue imaging data to find causal links between cellular genotypes, tissue microenvironment, and disease phenotypes. GML lab is also developing experimental technologies that enable large-scale profiling of spatial gene and protein expression (spatial omics) in a range of cancer tissues (focusing on brain and skin cancer) and in mouse brain and spinal cord.
Dr Quan Nguyen completed a PhD in Bioengineering at the University of Queensland in 2013, postdoctoral training in Bioinformatics at RIKEN institute in Japan in 2015, a CSIRO Office of Chief Executive (OCE) Research Fellowship in 2016, an IMB Fellow in 2018, an Australian Research Council DECRA fellowship (2019-2021), and is currently a National Health and Medical Research Council leadership fellow (EL2). He has published in top-tier journals, including Cell, Cell Stem Cell, Nature Methods, Nature Protocols, Nature Communications, Genome Research, Genome Biology and a prize-winning paper in GigaScience. In the past three years, he has contributed to the development of x8 open-source software, x2 web applications, and x4 databases for analysis of single-cell data and spatial transcriptomics. He is looking for enthusiastic research students and research staff to join his group.
Associate Professor Sonia Shah
National Heart Foundation Future Leader FellowNational Heart Foundation Future Leader Fellow, Senior Principal Research Fellow –Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:My group's research uses large-scale genomic data to address knowledge gaps in disease, with a particular focus on cardiovascular disease.
Research programme
1. Cardiovascular disease research using big-data and genomics: with the goal of improving prevention and treatment of cardiovascular disease. By focusing on underrepresented groups, including women, my research aims to also address inequity in cardiovascular outcomes. I am the lead of the South Asian Genes and Health in Australia (SAGHA) study, which aims to increase representation of Australian South Asians in cardiovascular and genomics research. See saghaus.org for further details.
2. Drug genomics: I'm interested in using genomic approaches to predict drug effects, including identification of drug repurposing opportunities as well as identifying unknown adverse effects of medication.
3. Liver transplant research: In this collaboration with the QLD Liver Transplant Unit, we are using genomics to understand the effect of normo-thermic perfusion (a new organ storage method) on liver function, with the long-term goal of improving our ability to predict transplant outcomes.
Career summary: I was awarded my PhD from University College London (UK) in cardiovascular genetics. I began my post-doctoral fellowship under the mentorship of Prof Peter Visscher at the Queensland Brain Institute in 2013. Between 2016-2018, I was the lead analyst for the International Heart Failure Genetics Consortium (HERMES). In 2018, I was awarded an NHMRC Early Career Researcher Fellowship to investigate the relationship between cardiovascular and brain-related disorders using large-scale genetic and genomic data, under the mentorship of Prof Naomi Wray. I currently hold a National Heart Foundation Future Leader Fellowship.
Recognition:
2024 Australian Academy of Science Ruth Stephens Gani Medal for outstanding contribution to genetics research
2023 1 of 5 global finalists for the Nature Inspiring Women in Science (Scientific Achievement Award)
2023 Lifesciences QLD Rose-Anne Kelso Award
2023: Named in Australia's Top 25 Women in Science by Newscorp
2022 Queensland Young Tall Poppy Award
2022 UQ Foundation Research Excellence Award
2021/2022 Australian Superstar of STEM,
2020 Genetic Society of Australasia Early Career Award
2020 Women in Technology Rising Star Science Award
Professor Peter Visscher
UQ Laureate Fellow and Group LeaderInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Visscher joined the University of Queensland in 2011, where he is Professor of Quantitative Genetics. He is a Laureate Fellow of the Australian Research Council. Visscher was elected a Fellow of the Australian Academy of Science in 2010, a Fellow of the Royal Society (London) in 2018 and a Foreign Member of the Royal Netherlands Academy of Arts and Sciences in 2018.
Visscher's research is about genetic variation for complex traits (including quantitative traits and disease) in populations, with the broad aim to understand and quantify the causes and consequences of human trait variation.
Prof Peter Visscher, Prof Naomi Wray and Prof Jian Yang together comprise the Executive Team of the Program in Complex Trait Genomics (PCTG). PCTG comprises a critical mass of more than 30 post-doctoral researchers plus research assistants and students, all supported by external grant funding. Their skills lie in the ability to develop and apply statistical methods within the framework of quantitative, population and statistical genetics and to use theory to understand and predict results from data analyses. They play leading roles in the international research consortia. The focus of current research activities is in the detection and fine-mapping of loci underlying complex traits (including common disease), based upon theoretical studies and applications of methods to large datasets, in population genetics studies using theoretical approaches and high-density genetic marker data, and in systems genomics studies.
Professor Loic Yengo
ARC Future Fellow - GLInstitute for Molecular BioscienceResearcher profile is public:1Supervisor:Researcher biography:Dr Loic Yengo is a Professor of Statistical Genomics at The University of Queensland (UQ) and Group Leader of the Statistical Genomics Laboratory within UQ's Institute for Molecular Bioscience. He was awarded a prestigious Snow Medical Research Fellowship in 2024 to dramatically advance the use of genomics to prevent chronic disease such as type 2 diabetes, heart disease and Alzheimer's, with a particular focus on increasing participation of people with diverse ancestries. After completing a PhD in applied mathematics and statistics at the University of Lille (France) in 2014, he joined UQ in 2016 for postdoctoral training in Quantitative and Statistical Genetics. Loic started his own lab in 2020 to investigate the causes and consequences of genetic variation within and between human populations. His group develops and applies novel statistical methods to analyse large volumes of genomic data. Loic's research has contributed to improving understanding of the genetic and phenotypic consequences of non-random mating (inbreeding and assortative mating) in human populations and has led to identifying novel genetic variants associated with complex traits and diseases. Loic was named among the top 40 rising stars of research by The Australian newspaper in 2021 and received the UQ Foundation research excellence award the same year. Loic is the 2022 recipient of the Ruth Stephens Gani Medal of the Australian Academy of Science recognizing outstanding contributions to research in human genetics, and was named in Nature Medicine's 2022 Yearbook among 11 early-career researchers "to watch".
In 2024, he was the recipient of the American Society of Human Genetics Early Career Award and a Snow Medical Research Foundation Fellowship to accelerate the deployment of genomic risk prediction in the clinic and improve the benefit of genomic medicine in all populations.
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People have known for thousands of years that parents pass traits to their children, but it is only relatively recently that our technology has caught up to our curiosity, enabling us to delve into the mystery of how this inheritance occurs, and the implications for predicting, preventing and treating disease.
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