Dr Gagandeep Singh
Postdoctoral Researcher
Institute for Molecular Bioscience
Publications
Journal Articles
Singh, Gagandeep and Gupta, Dinesh (2022). In-silico functional annotation of Plasmodium falciparum hypothetical proteins to identify novel drug targets. Frontiers in Genetics, 13 821516. doi: 10.3389/fgene.2022.821516
Thalor, Anamika, Joon, Hemant Kumar, Singh, Gagandeep, Roy, Shikha and Gupta, Dinesh (2022). Machine learning assisted analysis of breast cancer gene expression profiles reveals novel potential prognostic biomarkers for triple-negative breast cancer. Computational and Structural Biotechnology Journal, 20, 1618-1631. doi: 10.1016/j.csbj.2022.03.019
Singh, Gagandeep, Singh, Vikram and Singh, Vikram (2021). Genome-wide interologous interactome map (TeaGPIN) of Camellia sinensis. Genomics, 113 (1), 553-564. doi: 10.1016/j.ygeno.2020.09.048
Singh, Vikram, Singh, Gagandeep and Singh, Vikram (2020). TulsiPIN: an interologous protein Interactome of Ocimum tenuiflorum. Journal of Proteome Research, 19 (2), 884-899. doi: 10.1021/acs.jproteome.9b00683
Singh, Gagandeep and Singh, Vikram (2019). Construction and analysis of an interologous protein-protein interaction network of Camellia sinensis leaf (TeaLIPIN) from RNA-Seq data sets. Plant Cell Reports, 38, 1249-1262. doi: 10.1007/s00299-019-02440-y
Singh, Gagandeep, Singh, Gopal, Seth, Romit, Parmar, Rajni, Singh, Pradeep, Singh, Vikram, Kumar, Sanjay and Sharma, Ram Kumar (2019). Functional annotation and characterization of hypothetical protein involved in blister blight tolerance in tea (Camellia sinensis (L) O. Kuntze). Journal of Plant Biochemistry and Biotechnology, 28 (4), 447-459. doi: 10.1007/s13562-019-00492-5
Singh, Gagandeep and Singh, Vikram (2018). Functional elucidation of hypothetical proteins for their indispensable roles toward drug designing targets from Helicobacter pylori strain HPAG1. Journal of Biomolecular Structure & Dynamics, 36 (4), 906-918. doi: 10.1080/07391102.2017.1302361
Singh, Gopal, Singh, Gagandeep, Singh, Pradeep, Parmar, Rajni, Paul, Navgeet, Vashist, Radhika, Swarnkar, Mohit Kumar, Kumar, Ashok, Singh, Sanatsujat, Singh, Anil Kumar, Kumar, Sanjay and Sharma, Ram Kumar (2017). Molecular dissection of transcriptional reprogramming of steviol glycosides synthesis in leaf tissue during developmental phase transitions in Stevia rebaudiana Bert. Scientific Reports, 7 (1) 11835. doi: 10.1038/s41598-017-12025-y
Kaldate, Rahul, Rana, Maneet, Sharma, Vikas, Hirakawa, Hideki, Kumar, Rahul, Singh, Gagandeep, Chahota, Rakesh Kumar, Isobe, Sachiko N. and Sharma, Tilak Raj (2017). Development of genome-wide SSR markers in horsegram and their use for genetic diversity and cross-transferability analysis. Molecular Breeding, 37 (8) 103. doi: 10.1007/s11032-017-0701-1
Singh, Pradeep, Singh, Gagandeep, Bhandawat, Abhishek, Singh, Gopal, Parmar, Rajni, Seth, Romit and Sharma, Ram Kumar (2017). Spatial transcriptome analysis provides insights of key gene(s) involved in steroidal saponin biosynthesis in medicinally important herb Trillium govanianum. Scientific Reports, 7 (1) 45295. doi: 10.1038/srep45295
Singh, Gagandeep, Sharma, Dixit, Singh, Vikram, Rani, Jyoti, Marotta, Francessco, Kumar, Manoj, Mal, Gorakh and Singh, Birbal (2017). In silico functional elucidation of uncharacterized proteins of Chlamydia abortus strain LLG. Future Science OA, 3 (1). doi: 10.4155/fsoa-2016-0066
Kumar, Gulshan, Gupta, Khushboo, Pathania, Shivalika, Swarnkar, Mohit Kumar, Rattan, Usha Kumari, Singh, Gagandeep, Sharma, Ram Kumar and Singh, Anil Kumar (2017). Chilling affects phytohormone and post-embryonic development pathways during bud break and fruit set in apple (Malus domestica Borkh.). Scientific Reports, 7 (1) 42593. doi: 10.1038/srep42593
Bhandawat, Abhishek, Singh, Gagandeep, Seth, Romit, Singh, Pradeep and Sharma, Ram K. (2017). Genome-wide transcriptional profiling to elucidate key candidates involved in bud burst and rattling growth in a subtropical bamboo (Dendrocalamus hamiltonii). Frontiers in Plant Science, 7 2038. doi: 10.3389/fpls.2016.02038
Jayaswall, Kuldip, Mahajan, Pallavi, Singh, Gagandeep, Parmar, Rajni, Seth, Romit, Raina, Aparnashree, Swarnkar, Mohit Kumar, Singh, Anil Kumar, Shankar, Ravi and Sharma, Ram Kumar (2016). Transcriptome analysis reveals candidate genes involved in blister blight defense in tea (Camellia sinensis (L) Kuntze). Scientific Reports, 6 (1) 30412. doi: 10.1038/srep30412
Bhandawat, Abhishek, Singh, Gagandeep, Raina, Aparna Shree, Kaur, Jagdeep and Sharma, Ram Kumar (2016). Development of genic SSR marker resource from RNA-Seq data in Dendrocalamus latiflorus. Journal of Plant Biochemistry and Biotechnology, 25 (2), 179-190. doi: 10.1007/s13562-015-0323-9