Mr Han Chiu

Rumballe, Bree A., Chiu, Han Sheng, Georgas, Kylie M. and Little, Melissa H. (2012). Use of in situ hybridization to examine gene expression in the embryonic, neonatal, and adult urogenital system. Kidney development: Methods and protocols. (pp. 223-239) edited by Odysse Michos. New York , NY, United States: Humana Press. doi: 10.1007/978-1-61779-851-1_20

Neavin, Drew R., Steinmann, Angela M., Farbehi, Nona, Chiu, Han Sheng, Daniszewski, Maciej S., Arora, Himanshi, Bermudez, Yasmin, Moutinho, Cátia, Chan, Chia-Ling, Bax, Monique, Tyebally, Mubarika, Gnanasambandapillai, Vikkitharan, Lam, Chuan E., Nguyen, Uyen, Hernández, Damián, Lidgerwood, Grace E., Graham, Robert M., Hewitt, Alex W., Pébay, Alice, Palpant, Nathan J. and Powell, Joseph E. (2023). A village in a dish model system for population-scale hiPSC studies. Nature Communications, 14 (1) 3240, 1-12. doi: 10.1038/s41467-023-38704-1

Sinclair, Jane E., Bloxham, Conor J., Chiu, Han, Chew, Keng Yih, Russell, Jake, Yoshikawa, Yusuke, Bielefeldt-Ohmann, Helle, Steele, Lauren E., Hulme, Katina D., Verzele, Nathalie A. J., Noye, Ellesandra C., Wu, Melanie, Reichelt, Melissa E., Thomas, Walter G., Gallo, Linda A., Redd, Meredith A. and Short, Kirsty R. (2021). Type I diabetes mellitus increases the cardiovascular complications of influenza virus infection. Frontiers in Cellular and Infection Microbiology, 11 714440, 714440. doi: 10.3389/fcimb.2021.714440

Neavin, Drew, Nguyen, Quan, Daniszewski, Maciej S., Liang, Helena H., Chiu, Han Sheng, Wee, Yong Kiat, Senabouth, Anne, Lukowski, Samuel W., Crombie, Duncan E., Lidgerwood, Grace E., Hernández, Damián, Vickers, James C., Cook, Anthony L., Palpant, Nathan J., Pébay, Alice, Hewitt, Alex W. and Powell, Joseph E. (2021). Single cell eQTL analysis identifies cell type-specific genetic control of gene expression in fibroblasts and reprogrammed induced pluripotent stem cells. Genome Biology, 22 (1) 76, 1-19. doi: 10.1186/s13059-021-02293-3

Xu, Jun, Falconer, Caitlin, Nguyen, Quan, Crawford, Joanna, McKinnon, Brett D., Mortlock, Sally, Senabouth, Anne, Andersen, Stacey, Chiu, Han Sheng, Jiang, Longda, Palpant, Nathan J., Yang, Jian, Mueller, Michael D., Hewitt, Alex W., Pébay, Alice, Montgomery, Grant W., Powell, Joseph E. and Coin, Lachlan J. M. (2019). Genotype-free demultiplexing of pooled single-cell RNA-seq. Genome Biology, 20 (1) 290, 290. doi: 10.1186/s13059-019-1852-7

Nguyen, Quan H., Lukowski, Samuel W., Chiu, Han Sheng, Senabouth, Anne, Bruxner, Timothy J.C., Christ, Angelika N., Palpant, Nathan J. and Powell, Joseph E. (2018). Single-cell RNA-seq of human induced pluripotent stem cells reveals cellular heterogeneity and cell state transitions between subpopulations. Genome Research, 28 (7), 1053-1066. doi: 10.1101/gr.223925.117

Muttenthaler, Markus, Andersson, Asa, Vetter, Irina, Menon, Rohit, Busnelli, Marta, Ragnarsson, Lotten, Bergmayr, Christian, Arrowsmith, Sarah, Deuis, Jennifer R., Chiu, Han Sheng, Palpant, Nathan J., O'Brien, Margaret, Smith, Terry J., Wray, Susan, Neumann, Inga D., Gruber, Christian W., Lewis, Richard J. and Alewood, Paul F. (2017). Subtle modifications to oxytocin produce ligands that retain potency and improved selectivity across species. Science Signaling, 10 (508) eaan3398, 1-13. doi: 10.1126/scisignal.aan3398

Lefevre, James G., Chiu, Han S., Combes, Alexander N., Vanslambrouck, Jessica M., Ju, Ali, Hamilton, Nicholas A. and Little, Melissa H. (2017). Self-organisation after embryonic kidney dissociation is driven via selective adhesion of ureteric epithelial cells. Development, 144 (6), 1087-1096. doi: 10.1242/dev.140228

Iyer, Swati, Chhabra, Yash, Harvey, Tracey J., Wang, Richard, Chiu, Han Sheng, Smith, A. G., Thomas, Walter G., Pennisi, David J. and Piper, Michael (2017). CRIM1 is necessary for coronary vascular endothelial cell development and homeostasis. Journal of Molecular Histology, 48 (1), 53-61. doi: 10.1007/s10735-016-9702-3

Takasato, Minoru, Er, Pei X., Chiu, Han S. and Little, Melissa H. (2016). Generation of kidney organoids from human pluripotent stem cells. Nature Protocols, 11 (9), 1681-1692. doi: 10.1038/nprot.2016.098

Iyer, Swati, Chou, Fang Yu, Wang, Richard, Chiu, Han Sheng, Raju, Vinay K. Sundar, Little, Melissa H., Thomas, Walter G., Piper, Michael and Pennisi, David J. (2016). Crim1 has cell-autonomous and paracrine roles during embryonic heart development. Scientific Reports, 6 (1) 19832, 19832 .1-19832 .15. doi: 10.1038/srep19832

Takasato, Minoru, Er, Pei X., Chiu, Han S., Maier, Barbara, Baillie, Gregory J., Ferguson, Charles, Parton, Robert G., Wolvetang, Ernst J., Roost, Matthias S., de Sousa Lopes, Susana M. Chuva and Little, Melissa H. (2015). Kidney organoids from human iPS cells contain multiple lineages and model human nephrogenesis. Nature, 526 (7574), 564-568. doi: 10.1038/nature15695

Rumballe, Bree A, Chiu, Han Sheng, Georgas, Kylie M and Little, Melissa H (2012). Use of in situ hybridization to examine gene expression in the embryonic, neonatal, and adult urogenital system. Methods in Molecular Biology, 886, 223-239.

Weise, Carrie B., Ireland, Sara, Fleming, Nicole L., Yu, Jing, Valerius, M. Todd, Kylie Georgas, Chiu, Han Sheng, Brennan, Jane, Armstrong, Jane, Little, Melissa H., McMahon, Andrew P. and Southard-Smith, E. Michelle (2012). A genome-wide screen to identify transcription factors expressed in pelvic ganglia of the lower urinary tract. Frontiers in Neuroscience, 6 (SEP) Article 130. doi: 10.3389/fnins.2012.00130

Chiu, Han Sheng, York, Philippe J., Wilkinson, Lorine, Zhang, Pumin, Little, Melissa H. and Pennisi, David J. (2012). Production of a mouse line with a conditional Crim1 mutant allele. Genesis, 50 (9), 711-716. doi: 10.1002/dvg.22032

Chen, Huijun, Palmer, James S., Thaigarajan, Rathi D., Dinger, Marcel E., Frampton, Emmanuelle, Chiu, Hansheng, Schulz, Alexandra, Spiller, Cassy, Grimmond, Sean M., Little, Melissa H., Koopman, Peter A. and Wilhelm, Ingrid D. (2012). Identification of novel markers of mouse fetal ovary development. PLoS One, 7 (7) e41683, e41683.1-e41683.15. doi: 10.1371/journal.pone.0041683

Pennisi, D. J., Kinna, G., Chiu, H. S., Simmons, D. G., Wilkinson, L. and Little, M. H. (2012). Crim1 has an essential role in glycogen trophoblast cell and sinusoidal-trophoblast giant cell development in the placenta. Placenta, 33 (3), 175-182. doi: 10.1016/j.placenta.2011.12.014

Thiagarajan, Rathi D., Cloonan, Nicole, Gardiner, Brooke B., Mercer, Tim R., Kolle, Gabriel, Nourbaksh, Ehsan, Wani, Shivangi, Tang, Dave, Krishnan, Keerthana, Georgas, Kylie M., Rumballe, Bree A., Chiu, Han S., Steen, Jason A., Mattick, John S., Little, Melissa H. and Grimmond, Sean M. (2011). Refining transcriptional programs in kidney development by integration of deep RNA-sequencing and array-based spatial profiling. BMC Genomics, 12 (1) 441, 441-1-441-16. doi: 10.1186/1471-2164-12-441

Combes, A. N., Bowles, J., Feng, C. -W., Chiu, H. S., Khoo, P. L., Jackson, A., Little, M. H., Tam, P. P. L. and Koopman, P. (2011). Expression and functional analysis of Dkk1 during early gonadal development. Sexual Development, 5 (3), 124-130. doi: 10.1159/000327709

Georgas, K. M., Chiu, H. S., Lesieur, E., Rumballe, B. A. and Little, Melissa H. (2011). Expression of metanephric nephron-patterning genes in differentiating mesonephric tubules. Developmental Dynamics, 240 (6), 1600-1612. doi: 10.1002/dvdy.22640

Thiagarajan, Rathi D., Georgas, Kylie M., Rumballe, Bree A., Lesieur, Emmanuelle, Chiu, Han Sheng, Taylor, Darrin, Tang, Dave T. P., Grimmond, Sean M. and Little, Melissa H. (2011). Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways. PLoS One, 6 (2) e17286, 1-15. doi: 10.1371/journal.pone.0017286

Chiu, Han Sheng, Szucsik, John C., Georgas, Kylie M., Jones, Julia L., Rumballe, Bree A., Tang, Dave, Grimmond, Sean M., Lewis, Alfor G., Aronow, Bruce J., Lessard, James L. and Little, Melissa H. (2010). Comparative gene expression analysis of genital tubercle development reveals a putative appendicular Wnt7 network for the epidermal differentiation. Developmental Biology, 344 (2), 1071-1087. doi: 10.1016/j.ydbio.2010.05.495

Georgas, Kylie, Rumballe, Bree, Valerius, M. Todd, Chiu, Han Sheng, Thiagarajan, Rathi D., Lesieur, Emmanuelle, Aronow, Bruce J., Brunskill, Eric W., Combes, Alexander N., Tang, Dave, Taylor, Darrin, Grimmond, Sean M., Potter, S. Steven, McMahon, Andrew P. and Little, Melissa H. (2009). Analysis of early nephron patterning reveals a role for distal RV proliferation in fusion to the ureteric tip via a cap mesenchyme-derived connecting segment. Developmental Biology, 332 (2), 273-286. doi: 10.1016/j.ydbio.2009.05.578

Georgas, Kylie, Rumballe, Bree, Wilkinson, Lorine, Chiu, Han Sheng, Lesieur, Emmanuelle, Gilbert, Thierry and Little, Melissa H. (2008). Use of dual section mRNA in situ hybridization/immunohistochemistry to clarify gene expression patterns during the early stages of nephron development in the embryo and in the mature nephron of the adult mouse kidney. Histochemistry and Cell Biology, 130 (5), 927-942. doi: 10.1007/s00418-008-0454-3

Little, MH, Brennan, J, Georgas, K, Davies, JA, Davidson, DR, Baldock, RA, Beverdam, A, Bertram, JF, Capel, B, Chiu, HS, Clements, D, Cullen-McEwen, L, Fleming, J, Gilbert, T, Herzlinger, D, Houghton, D, Kaufman, MH, Kleymenova, E, Koopman, PA, Lewis, AG, McMahon, AP, Mendelsohn, CL, Mitchell, EK, Rumballe, BA, Sweeney, DE, Valerius, MT, Yamada, G, Yang, Y and Yu, J (2007). A high-resolution anatomical ontology of the developing murine genitourinary tract (vol 7, pg 680, 2007). Gene Expression Patterns, 8 (1), 47-50. doi: 10.1016/j.modgep.2007.07.003

Little, Melissa H., Brennan, Jane, Georgas, Kylie, Davies, Jamie A., Davidson, Duncan R., Baldock, Richard A., Beverdam, Annemiek, Bertram, John F., Capel, Blanche, Chiu, Han Sheng, Clements, Dave, Cullen-McEwen, Luise, Fleming, Jean, Gilbert, Thierry, Herzlinger, Doris, Houghton, Derek, Kaufman, Matt H., Kleymenova, Elena, Koopman, Peter A., Lewis, Alfor G., McMahon, Andrew P., Mendelsohn, Cathy L., Mitchell, Eleanor K., Rumballe, Bree A., Sweeney, Derina E., Valerius, M. Todd, Yamada, Gen, Yang, Yiya and Yu, Jing (2007). A high-resolution anatomical ontology of the developing murine genitourinary tract. Gene Expression Patterns, 7 (6), 680-699. doi: 10.1016/j.modgep.2007.03.002

Nguyen, Quan H., Lukowski, Samuel W., Chiu, Han S., Friedman, Clayton E., Senabouth, Anne, Crowhurst, Liam, Bruxner, Timothy J. C., Christ, Angelika N., Hudson, James, Ding, Jun, Bar-Joseph, Ziv, Tam, Patrick P. L., Palpant, Nathan J. and Powell, Joseph E. (2018). Genetic networks modulating cell fate specification and contributing to cardiac disease risk in hiPSC-derived cardiomyocytes at single cell resolution. Human Genome Meeting 2018, Yokohama, Japan, 12-15 March 2018. London, United Kingdom: Henry Stewart Publications LLP. doi: 10.1186/s40246-018-0138-6

Wilkinson, L. J., Chiu, H., Ju, A., Rumballe, B., Georgas, K., Moritz, K. M. and Little, M. H. (2011). Hypoxic conditions during kidney development disrupt nephron formation. ANZSN 2011: 47th Annual Scientific Meeting Australian and New Zealand Society of Nephrology, Adelaide, SA, Australia, 17-21 September 2011. Richmond, VIC, Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/j.1440-1797.2011.01491.x

Pennisi, David J., Chiu, Han S., Vinay, K. S., Wilkinson, Lorine, Zhang, Pumin and Little, Melissa H. (2010). Mice null for Crim1 display altered BMP/TGF beta signaling, defects in multiple organ systems and die in utero with severe cardiovascular defects. 69th Annual Meeting of the Society-for-Developmental-Biology/Japanese-Society-of-Developmental-Biologists, Albuquerque NM, AUG 05-09, 2010. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE. doi: 10.1016/j.ydbio.2010.05.270

Ebert, P. R., Cheng, Q., Valmas, N., Zuryn, S. J., Cha'on, U., Schlipalius, D., Collins, P., Mau, Y., Chen, W., Whan, A. P., Huang, Y. and Chiu, H. (2004). Molecular mechanisms of phosphine toxicity and the genetics of resistence. Entomology Strength in Diversity, Brisbane, Australia, 11-15 August. Australia: Carillon Conference Management.

Mr Han Chiu

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